RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 SPARCP09486 303 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 ACSM4P0C7M7 580 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 KITLGP21583 273 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 ANOS1P23352 680 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 RGS6P49758 472 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 CDH15P55291 814 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 TMEM33P57088 247 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 MRPS11P82912 194 aaKnown RBP10.42□□□□□ -0.74
MSH5-216ENST00000484309 TNFAIP6P98066 277 aaPredicted RBP10.42□□□□□ -0.74
MSH5-216ENST00000484309 HFEQ30201 348 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 FAM209AQ5JX71 171 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 OR2T2Q6IF00 324 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 SPATC1Q76KD6 591 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 LINC01356Q8N9X3 169 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 BHLHE23Q8NDY6 225 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 OR2Z1Q8NG97 314 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 CCL17Q92583 94 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 HPS1Q92902 700 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 APOBEC3DQ96AK3 386 aaPredicted RBP10.42□□□□□ -0.74
MSH5-216ENST00000484309 DCLRE1CQ96SD1 692 aaKnown RBP10.42□□□□□ -0.74
MSH5-216ENST00000484309 EGLN1Q9GZT9 426 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 BAIAP2Q9UQB8 552 aa10.42□□□□□ -0.74
MSH5-216ENST00000484309 ARRDC5A6NEK1 342 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 CLDN25C9JDP6 229 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 LCATP04180 440 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 ZNF3P17036 446 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 FMO3P31513 532 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 GRK5P34947 590 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 LIPAP38571 399 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 ENTPD1P49961 510 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 CDK5R2Q13319 367 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 GK3PQ14409 553 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 GINS1Q14691 196 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 CR1LQ2VPA4 569 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 ZMAT1Q5H9K5 638 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 FAM120AOSQ5T036 256 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 ACSM5Q6NUN0 579 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 CD300LDQ6UXZ3 194 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 DCXRQ7Z4W1 244 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 OR10AD1Q8NGE0 317 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 OR5L1Q8NGL2 311 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 ITLN1Q8WWA0 313 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 PTP4A1Q93096 173 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 HAVCR1Q96D42 359 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 COG8Q96MW5 612 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 NMNAT2Q9BZQ4 307 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 CMC2Q9NRP2 79 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 DNAJB9Q9UBS3 223 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 CGGBP1Q9UFW8 167 aaPredicted RBP10.41□□□□□ -0.74
MSH5-216ENST00000484309 CDC42EP3Q9UKI2 254 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 ZDHHC8Q9ULC8 765 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 WIPI2Q9Y4P8 454 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 DOCK11Q5JSL3 2073 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 CUBNO60494 3623 aa10.41□□□□□ -0.74
MSH5-216ENST00000484309 ATRQ13535 2644 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 IGHV3-64DA0A0J9YX35 117 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 ISPDA4D126 451 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 C5orf63A6NC05 138 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 H0YL77 283 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 M0R135 149 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 CD55P08174 381 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 ADH4P08319 380 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 RAC2P15153 192 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 SLC6A9P48067 706 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 SLC25A1P53007 311 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 LMO4P61968 165 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 ECH1Q13011 328 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 KRTAP27-1Q3LI81 207 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 FBXW12Q6X9E4 464 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 ATG16L2Q8NAA4 619 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 PAPD5Q8NDF8 572 aaKnown RBP10.4□□□□□ -0.74
MSH5-216ENST00000484309 ZNF799Q96GE5 643 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 C1QTNF5Q9BXJ0 243 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 YY1AP1Q9H869 796 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 ZNF556Q9HAH1 456 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 CENPMQ9NSP4 180 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 TMEM160Q9NX00 188 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 KCNG2Q9UJ96 466 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 N6AMT1Q9Y5N5 214 aa10.4□□□□□ -0.74
MSH5-216ENST00000484309 J3QW42 95 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 ZNF593O00488 134 aaPredicted RBP10.39□□□□□ -0.75
MSH5-216ENST00000484309 FAM157CP0CG43 387 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 SLC2A1P11166 492 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 OSMP13725 252 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 TUBG1P23258 451 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 TNFSF4P23510 183 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 PRKXP51817 358 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 TPTEP56180 551 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 GK2Q14410 553 aaPredicted RBP10.39□□□□□ -0.75
MSH5-216ENST00000484309 TAF13Q15543 124 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 SNAI3Q3KNW1 292 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 LINC01590Q5TEZ4 76 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 TMEM236Q5W0B7 351 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 SLC27A4Q6P1M0 643 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 PLBD1Q6P4A8 553 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 ERI1Q8IV48 349 aaKnown RBP10.39□□□□□ -0.75
MSH5-216ENST00000484309 OR6N2Q8NGY6 317 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 OR2AE1Q8NHA4 323 aa10.39□□□□□ -0.75
MSH5-216ENST00000484309 RAB1CQ92928 201 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms