RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 ZNF546Q86UE3 836 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 ZDHHC22Q8N966 263 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 FGGYQ96C11 551 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 C5orf34Q96MH7 638 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 NUDT16L1Q9BRJ7 211 aaKnown RBP17.56■□□□□ 0.4
LIMS2-215ENST00000484252 ZNF416Q9BWM5 594 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 SLC25A32Q9H2D1 315 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 PCDHB16Q9NRJ7 776 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 ALKBH4Q9NXW9 302 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 GPN3Q9UHW5 284 aaPredicted RBP17.56■□□□□ 0.4
LIMS2-215ENST00000484252 FARSAQ9Y285 508 aaKnown RBP17.56■□□□□ 0.4
LIMS2-215ENST00000484252 LMX1BO60663 402 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 ZNF28P17035 718 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 CBX5P45973 191 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 GSK3AP49840 483 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 FBXW4P57775 412 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 STK11Q15831 433 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 SCGB2B2Q4G0G5 96 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 WDR74Q6RFH5 385 aaPredicted RBP17.56■□□□□ 0.4
LIMS2-215ENST00000484252 COX15Q7KZN9 410 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 SLC22A24Q8N4F4 322 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 ACBD4Q8NC06 268 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 NUBPLQ8TB37 319 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 CNTD2Q9H8S5 307 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 ZMAT3Q9HA38 289 aaKnown RBP17.56■□□□□ 0.4
LIMS2-215ENST00000484252 KLHL13Q9P2N7 655 aa17.56■□□□□ 0.4
LIMS2-215ENST00000484252 A0A1W2PNV4 684 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 VSTM2BA6NLU5 285 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 RAB27BO00194 218 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 SLC25A4P12235 298 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 HLA-GP17693 338 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 ZNF345Q14585 488 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 SLC25A42Q86VD7 318 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 FJX1Q86VR8 437 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 BVESQ8NE79 360 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 OR1S1Q8NH92 325 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 C11orf40Q8WZ69 217 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 MARC2Q969Z3 335 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 RELTQ969Z4 430 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 ZBTB8AQ96BR9 441 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 SLAMF6Q96DU3 332 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 COMMD9Q9P000 198 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 MYEF2Q9P2K5 600 aaKnown RBP17.55■□□□□ 0.4
LIMS2-215ENST00000484252 FBLN5Q9UBX5 448 aa17.55■□□□□ 0.4
LIMS2-215ENST00000484252 IGKV1D-43A0A0B4J1Z2 117 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 OR14I1A6ND48 311 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 OR5H14A6NHG9 310 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 LIPT2A6NK58 231 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 POM121CA8CG34 1229 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 ETV2O00321 342 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-215ENST00000484252 TTRP02766 147 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 TRAPPC6BQ86SZ2 158 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 APCDD1LQ8NCL9 501 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 OR1M1Q8NGA1 313 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 STT3BQ8TCJ2 826 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 NPAS1Q99742 590 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 ZNF768Q9H5H4 540 aaKnown RBP17.54■□□□□ 0.4
LIMS2-215ENST00000484252 MED29Q9NX70 200 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 NOP16Q9Y3C1 178 aaKnown RBP17.54■□□□□ 0.4
LIMS2-215ENST00000484252 IGHV3-20A0A0C4DH32 117 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 SYT7O43581 403 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 OR2F2O95006 317 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 HLA-AP01891 365 aaKnown RBP17.54■□□□□ 0.4
LIMS2-215ENST00000484252 TBPP20226 339 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 CXADRP78310 365 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 FOXF1Q12946 379 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 SQSTM1Q13501 440 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 OR2F1Q13607 317 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 CDNFQ49AH0 187 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 FAHD2BQ6P2I3 314 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-215ENST00000484252 CORO6Q6QEF8 472 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 ANKRD37Q7Z713 158 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 LYG2Q86SG7 212 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 KCNRGQ8N5I3 272 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 DTWD2Q8NBA8 298 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 NFAM1Q8NET5 270 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-215ENST00000484252 OR5T2Q8NGG2 359 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 FAHD2AQ96GK7 314 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 C1QTNF6Q9BXI9 259 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 PBOV1Q9GZY1 135 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 SLC22A11Q9NSA0 550 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 CYB5R1Q9UHQ9 305 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 VSIG4Q9Y279 399 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 PLEKHA6Q9Y2H5 1048 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 PRELID3BQ9Y3B1 194 aa17.54■□□□□ 0.4
LIMS2-215ENST00000484252 KLF2Q9Y5W3 355 aaPredicted RBP17.54■□□□□ 0.4
LIMS2-215ENST00000484252 IGLV3-12A0A075B6K2 115 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 D6RAR5 112 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 EIF1AYO14602 144 aaKnown RBP17.53■□□□□ 0.4
LIMS2-215ENST00000484252 SPDEFO95238 335 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 ERCC1P07992 297 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-215ENST00000484252 ZBTB25P24278 435 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 MSX1P28360 303 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 GNALP38405 381 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 QRFPP83859 136 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 FLI1Q01543 452 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-215ENST00000484252 RHBDD2Q6NTF9 364 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 C16orf47Q6ZP98 133 aaPredicted RBP17.53■□□□□ 0.4
LIMS2-215ENST00000484252 SHISA6Q6ZSJ9 500 aa17.53■□□□□ 0.4
LIMS2-215ENST00000484252 RABEPKQ7Z6M1 372 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms