RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 RAC2P15153 192 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 ACHEP22303 614 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 USF1P22415 310 aaPredicted RBP15.34■□□□□ 0.05
HDAC6-225ENST00000483506 SLC2A5P22732 501 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 GSTT1P30711 240 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 MAGEB1P43366 347 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 ZNF81P51508 661 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 PPP2R2BQ00005 443 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 PTGES3Q15185 160 aaKnown RBP15.34■□□□□ 0.05
HDAC6-225ENST00000483506 ZMAT1Q5H9K5 638 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 SLC35D3Q5M8T2 416 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 TMEM236Q5W0B7 351 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 PLBD1Q6P4A8 553 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 DCXRQ7Z4W1 244 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 TIGD4Q8IY51 512 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 GTF3AQ92664 365 aaKnown RBP15.34■□□□□ 0.05
HDAC6-225ENST00000483506 RDH5Q92781 318 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 HAVCR1Q96D42 359 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 INTS14Q96SY0 518 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 BPESC1Q9GZL8 116 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 PURGQ9UJV8 347 aaKnown RBP15.34■□□□□ 0.05
HDAC6-225ENST00000483506 OAZ3Q9UMX2 235 aa15.34■□□□□ 0.05
HDAC6-225ENST00000483506 PLSCR5A0PG75 271 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 ZAR1LA6NP61 321 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 MITFO75030 526 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-225ENST00000483506 IGHV1-46P01743 117 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 SPARCP09486 303 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 RIPPLY3P57055 190 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 RHOUQ7L0Q8 258 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 CPOQ8IVL8 374 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 C10orf67Q8IYJ2 551 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 SPTSSAQ969W0 71 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 CMBLQ96DG6 245 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 PLEKHA8Q96JA3 519 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 DIRC2Q96SL1 478 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 PRRG3Q9BZD7 231 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 SEMA6AQ9H2E6 1030 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 CHODLQ9H9P2 273 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 ZDHHC8Q9ULC8 765 aa15.33■□□□□ 0.04
HDAC6-225ENST00000483506 F5H5K5 113 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 M0R135 149 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 RP2O75695 350 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 CD55P08174 381 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 TACSTD2P09758 323 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 COL8A2P25067 703 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 EPHA2P29317 976 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 TPTEP56180 551 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 EFNB1P98172 346 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 CDK5R2Q13319 367 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 SNAPC1Q16533 368 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 CARTPTQ16568 116 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 TMEM249Q2WGJ8 235 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 SLX4IPQ5VYV7 408 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 CXXC5Q7LFL8 322 aaKnown RBP15.32■□□□□ 0.04
HDAC6-225ENST00000483506 SHFQ7M4L6 423 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 YIPF5Q969M3 257 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 SLAMF6Q96DU3 332 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 ZNF799Q96GE5 643 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 RAB3IPQ96QF0 476 aaPredicted RBP15.32■□□□□ 0.04
HDAC6-225ENST00000483506 CIB1Q99828 191 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 GABARAPL3Q9BY60 117 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 OR51V1Q9H2C8 321 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 NAV3Q8IVL0 2385 aa15.32■□□□□ 0.04
HDAC6-225ENST00000483506 IGHV4-61A0A0C4DH41 118 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 ZNF878C9JN71 531 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 LYNX1G3V0Z9 82 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 CD5LO43866 347 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 TIMM8AO60220 97 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-225ENST00000483506 LYNX1P0DP58 116 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 IGFBP5P24593 272 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 CRYBB2P43320 205 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 TMEM33P57088 247 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 CCL8P80075 99 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 C12orf73Q69YU5 71 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 DRAM2Q6UX65 266 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 DPY19L4Q7Z388 723 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 ERI1Q8IV48 349 aaKnown RBP15.31■□□□□ 0.04
HDAC6-225ENST00000483506 BBS1Q8NFJ9 593 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 OR6N2Q8NGY6 317 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 RNF133Q8WVZ7 376 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 OTULINQ96BN8 352 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 ZMYND19Q96E35 227 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-225ENST00000483506 KCNJ15Q99712 375 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 PKP2Q99959 881 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 RBM4BQ9BQ04 359 aaKnown RBP15.31■□□□□ 0.04
HDAC6-225ENST00000483506 TVP23BQ9NYZ1 205 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 PTTG3PQ9NZH4 202 aa15.31■□□□□ 0.04
HDAC6-225ENST00000483506 ANK3Q12955 4377 aaKnown RBP15.3■□□□□ 0.04
HDAC6-225ENST00000483506 A0A1B0GWJ7 208 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 PRKYO43930 277 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 LILRA1O75019 489 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 SONP18583 2426 aaKnown RBP15.3■□□□□ 0.04
HDAC6-225ENST00000483506 GRB2P62993 217 aaKnown RBP15.3■□□□□ 0.04
HDAC6-225ENST00000483506 GGTLC2Q14390 218 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 HLXQ14774 488 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-225ENST00000483506 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.3■□□□□ 0.04
HDAC6-225ENST00000483506 Q6ZR03 302 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 Q71RC1 249 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-225ENST00000483506 NAA40Q86UY6 237 aa15.3■□□□□ 0.04
HDAC6-225ENST00000483506 ZNF454Q8N9F8 522 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms