RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 RAB32Q13637 225 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 ELAVL3Q14576 367 aaKnown RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 RHEBQ15382 184 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 SLC9A3R2Q15599 337 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 MESTQ5EB52 335 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.89□□□□□ -0.83
RPGR-208ENST00000482855 SLC35D2Q76EJ3 337 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 PPP1R3BQ86XI6 285 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 TMEFF1Q8IYR6 380 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 OR4N2Q8NGD1 307 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 OR52R1Q8NGF1 315 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 OR51A2Q8NGJ7 313 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 CMBLQ96DG6 245 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 GUCD1Q96NT3 240 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 METTL8Q9H825 291 aaKnown RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 LMAN1LQ9HAT1 526 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 GAR1Q9NY12 217 aaKnown RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 SPACA6W5XKT8 324 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 EDDM13A0A1B0GTR0 161 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 URADA6NGE7 173 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 ARGFXA6NJG6 315 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 GPR75O95800 540 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 PNPP00491 289 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 CST4P01036 141 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 CSTAP01040 98 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 HLA-DQA2P01906 255 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 PMP2P02689 132 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 IGFBP3P17936 291 aaPredicted RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 FSTP19883 344 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 TBPP20226 339 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 RAB6AP20340 208 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 ZNF10P21506 573 aaPredicted RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 RBP2P50120 134 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 MGAT2Q10469 447 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 ENPP2Q13822 863 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 ZNHIT3Q15649 155 aaPredicted RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 ZNF74Q16587 644 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 HNRNPA1L2Q32P51 320 aaKnown RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 EEF1A1P5Q5VTE0 462 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 HOGA1Q86XE5 327 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 ZNF615Q8N8J6 731 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 LRRC75AQ8NAA5 344 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 WFIKKN2Q8TEU8 576 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 FAM46BQ96A09 425 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 S100PBPQ96BU1 408 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 ZNF775Q96BV0 537 aaPredicted RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 CHST5Q9GZS9 411 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 RAB33BQ9H082 229 aa9.89□□□□□ -0.83
RPGR-208ENST00000482855 GDF2Q9UK05 429 aaPredicted RBP9.89□□□□□ -0.83
RPGR-208ENST00000482855 IGKV1D-42A0A075B6H8 117 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 UMAD1C9J7I0 102 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 RAB27BO00194 218 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 SFT2D2O95562 160 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 CISD3P0C7P0 127 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 BTF3P20290 206 aaKnown RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 RIDAP52758 137 aaKnown RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 GUK1Q16774 197 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 OTPQ5XKR4 325 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 ZNF761Q86XN6 746 aaPredicted RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 ZNF679Q8IYX0 411 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 TMEM52Q8NDY8 209 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 MOGAT1Q96PD6 335 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 TSPAN32Q96QS1 320 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.88□□□□□ -0.83
RPGR-208ENST00000482855 STARD10Q9Y365 291 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 FLVCR1Q9Y5Y0 555 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 ARID1BQ8NFD5 2236 aaPredicted RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 WIPF3A6NGB9 483 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 TXNDC12O95881 172 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 LINC00271P0C7V0 271 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 SMIM10L1P0DMW3 83 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 P2RY2P41231 377 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 PSG6Q00889 435 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 ZNF77Q15935 545 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 ZNF239Q16600 458 aaKnown RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 EMC4Q5J8M3 183 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 TMEM268Q5VZI3 342 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 CDPF1Q6NVV7 123 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 HIST2H3AQ71DI3 136 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 TAF8Q7Z7C8 310 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 FAM219AQ8IW50 185 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 ARRDC1Q8N5I2 433 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 CSNK1A1LQ8N752 337 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 AKR7LQ8NHP1 331 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 LYPD6BQ8NI32 183 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 RNASE11Q8TAA1 199 aaKnown RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 CPNE4Q96A23 557 aaPredicted RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 SMIM10Q96HG1 83 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 EIF5A2Q9GZV4 153 aaKnown RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 PARPBPQ9NWS1 579 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 PRR13Q9NZ81 148 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 RAB22AQ9UL26 194 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 TBC1D3DA0A087WVF3 549 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 GPR89AB7ZAQ6 455 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 TBC1D3LB9A6J9 549 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 GPR89BP0CG08 455 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 SNCAP37840 140 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 ACTR1BP42025 376 aa9.88□□□□□ -0.83
RPGR-208ENST00000482855 RPS10P46783 165 aaKnown RBP9.88□□□□□ -0.83
RPGR-208ENST00000482855 RAB1AP62820 205 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms