RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 FBXO24O75426 580 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 SCG5P05408 212 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 TSPAN19P0C672 248 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 CD247P20963 164 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 RPL27P61353 136 aaKnown RBP12.26□□□□□ -0.45
HDAC6-224ENST00000481929 HOXA4Q00056 320 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-224ENST00000481929 MAB21L1Q13394 359 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 LAPTM4AQ15012 233 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 OR8B8Q15620 311 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 ALG10Q5BKT4 473 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 LRIF1Q5T3J3 769 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 PRAMEF6Q5VXH4 476 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 METAP1DQ6UB28 335 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-224ENST00000481929 CALHM3Q86XJ0 350 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 OR4D11Q8NGI4 311 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 PPP1R35Q8TAP8 253 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 CLPTM1LQ96KA5 538 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 ZNF583Q96ND8 569 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 RANBP3Q9H6Z4 567 aaPredicted RBP12.26□□□□□ -0.45
HDAC6-224ENST00000481929 ONECUT1Q9UBC0 465 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 RNF7Q9UBF6 113 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 CORO2BQ9UQ03 480 aa12.26□□□□□ -0.45
HDAC6-224ENST00000481929 TRAV38-1A0A0B4J264 116 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 A0A1B0GWJ7 208 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 UBDO15205 165 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 IGF2P01344 180 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 IGLL1P15814 213 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 CD33P20138 364 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 CD200P41217 278 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 RAD23AP54725 363 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 ZBTB37Q5TC79 503 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 NDUFA11Q86Y39 141 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 CMTM4Q8IZR5 234 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 LIPHQ8WWY8 451 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 ST8SIA4Q92187 359 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 APOBEC3DQ96AK3 386 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-224ENST00000481929 CPPED1Q9BRF8 314 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-224ENST00000481929 ROPN1BQ9BZX4 212 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-224ENST00000481929 FN3KRPQ9HA64 309 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 ROPN1Q9HAT0 212 aaPredicted RBP12.25□□□□□ -0.45
HDAC6-224ENST00000481929 SIRT7Q9NRC8 400 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 C20orf141Q9NUB4 165 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 SLAMF8Q9P0V8 285 aa12.25□□□□□ -0.45
HDAC6-224ENST00000481929 RPUSD1Q9UJJ7 312 aaKnown RBP12.25□□□□□ -0.45
HDAC6-224ENST00000481929 A0A1W2PRD5 423 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 A0A1W2PRF3 423 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 A0A1W2PRM7 423 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 OR6C6A6NF89 314 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 A6NIZ1 184 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 EVPLLA8MZ36 301 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 H3BUX3 64 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 M0QX08 132 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 FBP2O00757 339 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 DVL1O14640 695 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 PPP1R3DO95685 299 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 DBHP09172 617 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 KITP10721 976 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 GPX2P18283 190 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 RBM34P42696 430 aaKnown RBP12.24□□□□□ -0.45
HDAC6-224ENST00000481929 RAP1BP61224 184 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 RAP1AP62834 184 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 COL10A1Q03692 680 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 AQP6Q13520 282 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 MPPED2Q15777 294 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 BEND6Q5SZJ8 279 aaPredicted RBP12.24□□□□□ -0.45
HDAC6-224ENST00000481929 PGBD2Q6P3X8 592 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 DTX3Q8N9I9 347 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 OR1F12Q8NHA8 337 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 TMEM255BQ8WV15 326 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 MAELQ96JY0 434 aaKnown RBP12.24□□□□□ -0.45
HDAC6-224ENST00000481929 HCAR1Q9BXC0 346 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 CENPHQ9H3R5 247 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 IKZF5Q9H5V7 419 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 VAPAQ9P0L0 249 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 GMEB1Q9Y692 573 aa12.24□□□□□ -0.45
HDAC6-224ENST00000481929 MEIOCA2RUB1 952 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 OOEPA6NGQ2 149 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 GYPAP02724 150 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 SAA4P35542 130 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 CTXN1P60606 82 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 NKAIN4Q8IVV8 208 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 C11orf65Q8NCR3 313 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 TMEM239Q8WW34 195 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 B9D2Q9BPU9 175 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 WDR76Q9H967 626 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 RAB18Q9NP72 206 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 ATPIF1Q9UII2 106 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 HIF3AQ9Y2N7 669 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 MAB21L2Q9Y586 359 aa12.23□□□□□ -0.45
HDAC6-224ENST00000481929 BIRC6Q9NR09 4857 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 DNAH9Q9NYC9 4486 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 WI2-2373I1.2A0A1W2PRP0 233 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 H7C1C5 153 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 FCN3O75636 299 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 CD28P10747 220 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 LCN6P62502 163 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 PRB3Q04118 309 aaPredicted RBP12.22□□□□□ -0.45
HDAC6-224ENST00000481929 KLRD1Q13241 179 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 LY6EQ16553 131 aa12.22□□□□□ -0.45
HDAC6-224ENST00000481929 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms