RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TNFRSF19Q9NS68 423 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 TMEM100Q9NV29 134 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 NDE1Q9NXR1 346 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 GMPR2Q9P2T1 348 aaKnown RBP5.98□□□□□ -1.45
COL17A1-205ENST00000480127 IL19Q9UHD0 177 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 OPN4Q9UHM6 478 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 MAGEL2Q9UJ55 1249 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 STARD10Q9Y365 291 aa5.98□□□□□ -1.45
COL17A1-205ENST00000480127 IGHV3OR16-10A0A075B7F0 116 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 TRBV4-1A0A0J9YWV2 114 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 FFAR1O14842 300 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 TBX1O43435 398 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 GPANK1O95872 356 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 CYB5R3P00387 301 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 CD55P08174 381 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 DBHP09172 617 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 PITPNBP48739 271 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 MNAT1P51948 309 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF133P52736 654 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 MZT1Q08AG7 82 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 CDK5R2Q13319 367 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 ZMYND11Q15326 602 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 GFOD2Q3B7J2 385 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 SAMD4BQ5PRF9 694 aaKnown RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 GPR157Q5UAW9 335 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 C16orf89Q6UX73 402 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 HACD2Q6Y1H2 254 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF283Q8N7M2 679 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 SIGLECL1Q8N7X8 197 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 FAM156AQ8NDB6 213 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 SDR9C7Q8NEX9 313 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 OR8G5Q8NG78 346 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 OR6K6Q8NGW6 343 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 OR8S1Q8NH09 359 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 ZNF420Q8TAQ5 688 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 POP5Q969H6 163 aaKnown RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 HAVCR1Q96D42 359 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 C1orf147Q96MC9 270 aaPredicted RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 TSSK2Q96PF2 358 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 NMNAT3Q96T66 252 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 ATF6BQ99941 703 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 UNKLQ9H9P5 680 aaKnown RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 PATZ1Q9HBE1 687 aaKnown RBP5.97□□□□□ -1.45
COL17A1-205ENST00000480127 UFSP2Q9NUQ7 469 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 NDUFAF4Q9P032 175 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 CLN8Q9UBY8 286 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 MIOXQ9UGB7 285 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 NUP50Q9UKX7 468 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 SIGLEC7Q9Y286 467 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 LRCH1Q9Y2L9 728 aa5.97□□□□□ -1.45
COL17A1-205ENST00000480127 TRRAPQ9Y4A5 3859 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 PPIAL4EA0A075B759 164 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 DNAJC9-AS1A6NH13 148 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 RIIAD1A6NNX1 92 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 CEACAM18A8MTB9 384 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 PPIAL4DF5H284 164 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 F5H5P2 479 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 TMEM178BH3BS89 294 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 J3QW42 95 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 DCTN3O75935 186 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 IFNGP01579 166 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 IGHV2-70P01814 119 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 HLA-DPB1P04440 258 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 SPARCP09486 303 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 TSPAN19P0C672 248 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 PPIAL4FP0DN26 164 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 KITLGP21583 273 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 PRTN3P24158 256 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 ZFP36P26651 326 aaKnown RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 HSD11B1P28845 292 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 GNALP38405 381 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 MMP16P51512 607 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 TRAP1Q12931 704 aaKnown RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 ZNF154Q13106 437 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 OCLNQ16625 522 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 TMEM155Q4W5P6 130 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 CGB2Q6NT52 195 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 LRRN1Q6UXK5 716 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 SPATC1Q76KD6 591 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 DOK3Q7L591 496 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 LRRC28Q86X40 367 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 ZDHHC21Q8IVQ6 265 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 LRRC75AQ8NAA5 344 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 OR2T4Q8NH00 348 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 GNPDA2Q8TDQ7 276 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 TAF15Q92804 592 aaKnown RBP eCLIP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 SLCO4A1Q96BD0 722 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 NMD3Q96D46 503 aaKnown RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 NEIL1Q96FI4 390 aaPredicted RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 PYURFQ96I23 114 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 MEGF10Q96KG7 1140 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 LRGUKQ96M69 825 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 CDRT15Q96T59 188 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 COQ7Q99807 217 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 ADAT1Q9BUB4 502 aaKnown RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 OR52D1Q9H346 318 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 FN3KQ9H479 309 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 POFUT1Q9H488 388 aa5.96□□□□□ -1.46
COL17A1-205ENST00000480127 ZMAT3Q9HA38 289 aaKnown RBP5.96□□□□□ -1.46
COL17A1-205ENST00000480127 FN3KRPQ9HA64 309 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms