RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 GFOD2Q3B7J2 385 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 ATPAF1Q5TC12 328 aaPredicted RBP9.61□□□□□ -0.87
VPS52-217ENST00000478934 PTCRAQ6ISU1 281 aaPredicted RBP9.61□□□□□ -0.87
VPS52-217ENST00000478934 C3orf33Q6P1S2 294 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 BPIFB2Q8N4F0 458 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 STEAP2Q8NFT2 490 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 OR13C9Q8NGT0 318 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 MFSD8Q8NHS3 518 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 ZNF319Q9P2F9 582 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 RPH3AQ9Y2J0 694 aaPredicted RBP9.61□□□□□ -0.87
VPS52-217ENST00000478934 G3V3Y1 287 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 LDLRAD4O15165 306 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 ZNF735P0CB33 412 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 ABOP16442 354 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 M6PRP20645 277 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 IKZF1Q13422 519 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 UNC119Q13432 240 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 GK2Q14410 553 aaPredicted RBP9.61□□□□□ -0.87
VPS52-217ENST00000478934 TAF13Q15543 124 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 SPERTQ8NA61 448 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 OR1S1Q8NH92 325 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 OR51E1Q8TCB6 317 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 CASTOR1Q8WTX7 329 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 DNASE2BQ8WZ79 361 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 MARVELD3Q96A59 401 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 ZNF75AQ96N20 296 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 NICN1Q9BSH3 213 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 FAM206AQ9NX38 181 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 OCIAD1Q9NX40 245 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 TAS2R8Q9NYW2 309 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 PPP4R1LQ9P1A2 415 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 KIF25Q9UIL4 384 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 PLEKHA6Q9Y2H5 1048 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 NOP16Q9Y3C1 178 aaKnown RBP9.61□□□□□ -0.87
VPS52-217ENST00000478934 PI4KAP42356 2102 aa9.61□□□□□ -0.87
VPS52-217ENST00000478934 LY6G6EA0A0G2JKS1 128 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ZNF736B4DX44 427 aaPredicted RBP9.6□□□□□ -0.87
VPS52-217ENST00000478934 CYB5AP00167 134 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 HLA-AP01891 365 aaKnown RBP9.6□□□□□ -0.87
VPS52-217ENST00000478934 ITGB2P05107 769 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 GNB3P16520 340 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 DHRS2Q13268 280 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 CDNFQ49AH0 187 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 TMEM71Q6P5X7 295 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ATRAIDQ6UW56 229 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ADGRE4PQ86SQ3 457 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ZNF546Q86UE3 836 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 LYPD6Q86Y78 171 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 C12orf45Q8N5I9 185 aaPredicted RBP9.6□□□□□ -0.87
VPS52-217ENST00000478934 ZNF454Q8N9F8 522 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 OR13C8Q8NGS7 320 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 C15orf40Q8WUR7 153 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ST8SIA1Q92185 356 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 OR5B2Q96R09 309 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 PDCD10Q9BUL8 212 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 PBOV1Q9GZY1 135 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 METTL7AQ9H8H3 244 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 GDF2Q9UK05 429 aaPredicted RBP9.6□□□□□ -0.87
VPS52-217ENST00000478934 VSIG4Q9Y279 399 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 U3KQA8 63 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 IGHV5-10-1A0A0J9YXX1 117 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 A0A1W2PP11 408 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 VSTM2BA6NLU5 285 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 HSPB2A8KAH6 182 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 E9PLN8 166 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 K7ESF4 209 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 CDK2AP1O14519 115 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 RER1O15258 196 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 SIGLEC6O43699 453 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 TMEM127O75204 238 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 AVPR2P30518 371 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 APOBEC1P41238 236 aaKnown RBP9.6□□□□□ -0.87
VPS52-217ENST00000478934 DHPSP49366 369 aaPredicted RBP9.6□□□□□ -0.87
VPS52-217ENST00000478934 TAS2R19P59542 299 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 HSPB2Q16082 182 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ELP2Q6IA86 826 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ZNF813Q6ZN06 617 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 NAA40Q86UY6 237 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 FJX1Q86VR8 437 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 BEST3Q8N1M1 668 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 SCARB1Q8WTV0 552 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 RNF133Q8WVZ7 376 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 ST8SIA4Q92187 359 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 MRGPRFQ96AM1 343 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 DDIT4LQ96D03 193 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 TMPRSS13Q9BYE2 586 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 TGIF2Q9GZN2 237 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 CHRDQ9H2X0 955 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 CYB5R1Q9UHQ9 305 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 LHFPL6Q9Y693 200 aa9.6□□□□□ -0.87
VPS52-217ENST00000478934 RAB27BO00194 218 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 SYT7O43581 403 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 CFPP27918 469 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 DAP3P51398 398 aaKnown RBP9.59□□□□□ -0.87
VPS52-217ENST00000478934 PCK2Q16822 640 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 PLPPR5Q32ZL2 321 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 DTX1Q86Y01 620 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 SPSB2Q99619 263 aa9.59□□□□□ -0.87
VPS52-217ENST00000478934 CRB3Q9BUF7 120 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms