RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 ERICH4A6NGS2 130 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 ERI2A8K979 691 aaKnown RBP3.44□□□□□ -1.86
UPF3B-203ENST00000478840 FAM166BA8MTA8 275 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 KLLNB2CW77 178 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 TRIM49D1C9J1S8 452 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 ANKRD65E5RJM6 399 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 H7C417 338 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 GABRPO00591 440 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 CD5LO43866 347 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 LCA5LO95447 670 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 PAHP00439 452 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 CATP04040 527 aaKnown RBP3.44□□□□□ -1.86
UPF3B-203ENST00000478840 PCCAP05165 728 aaPredicted RBP3.44□□□□□ -1.86
UPF3B-203ENST00000478840 EIF4EP06730 217 aaKnown RBP3.44□□□□□ -1.86
UPF3B-203ENST00000478840 PGA4P0DJD7 388 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 PGA3P0DJD8 388 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 GABRG2P18507 467 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 RAB3AP20336 220 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 IL32P24001 234 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 PPP1CBP62140 327 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 ART3Q13508 389 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 TFDP2Q14188 446 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 RGNQ15493 299 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 VAMP3Q15836 100 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 Q3ZCU0 254 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 HES5Q5TA89 166 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 ARL9Q6T311 187 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 DUSP18Q8NEJ0 188 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 BAALCQ8WXS3 180 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 NTAN1Q96AB6 310 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 FAM131CQ96AQ9 280 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 TMIGD2Q96BF3 282 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 ZNF681Q96N22 645 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 CHID1Q9BWS9 393 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 FAM49BQ9NUQ9 324 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 MTFP1Q9UDX5 166 aa3.44□□□□□ -1.86
UPF3B-203ENST00000478840 MN1Q10571 1320 aaPredicted RBP3.44□□□□□ -1.86
UPF3B-203ENST00000478840 SBNO1A3KN83 1393 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 ZNF646O15015 1829 aaPredicted RBP3.43□□□□□ -1.86
UPF3B-203ENST00000478840 A6NDX4 124 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 PDZK1P1A8MUH7 402 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 H7C1H1 209 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 NVLO15381 856 aaKnown RBP3.43□□□□□ -1.86
UPF3B-203ENST00000478840 CTSLP07711 333 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 CD3GP09693 182 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 ADRB3P13945 408 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 FAM86B1Q8N7N1 296 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 Q8N9W7 124 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 MDS2Q8NDY4 140 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 ZNF596Q8TC21 504 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 TMEM158Q8WZ71 300 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 OR8D1Q8WZ84 308 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 RGP1Q92546 391 aaPredicted RBP3.43□□□□□ -1.86
UPF3B-203ENST00000478840 TFGQ92734 400 aaPredicted RBP3.43□□□□□ -1.86
UPF3B-203ENST00000478840 FAM104AQ969W3 186 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 EXOSC8Q96B26 276 aaKnown RBP3.43□□□□□ -1.86
UPF3B-203ENST00000478840 SGTBQ96EQ0 304 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 TAAR1Q96RJ0 339 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 SAV1Q9H4B6 383 aaPredicted RBP3.43□□□□□ -1.86
UPF3B-203ENST00000478840 ARMC7Q9H6L4 198 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 AGPAT3Q9NRZ7 376 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 RPS6KB2Q9UBS0 482 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 PRG3Q9Y2Y8 225 aaPredicted RBP3.43□□□□□ -1.86
UPF3B-203ENST00000478840 MROH7Q68CQ1 1323 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 MAP3K15Q6ZN16 1313 aa3.43□□□□□ -1.86
UPF3B-203ENST00000478840 HACD1B0YJ81 288 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 RP2O75695 350 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 VAPBO95292 243 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 GLAP06280 429 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 OR8U9P0C7N5 309 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 P2RX1P51575 399 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 OR2B8PP59922 312 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 GINS1Q14691 196 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 METTL21CQ5VZV1 264 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 DNAJC24Q6P3W2 148 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 ST13P4Q8IZP2 240 aaPredicted RBP3.42□□□□□ -1.86
UPF3B-203ENST00000478840 SPAG16Q8N0X2 631 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 OTUD6BQ8N6M0 293 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 TRIML2Q8N7C3 387 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 SNX31Q8N9S9 440 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 OR8U1Q8NH10 309 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 NDNFQ8TB73 568 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 ZFP90Q8TF47 636 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 ABHD3Q8WU67 409 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 RNF138Q8WVD3 245 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 RCN3Q96D15 328 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 DYNLL2Q96FJ2 89 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 ZBED3Q96IU2 234 aaPredicted RBP3.42□□□□□ -1.86
UPF3B-203ENST00000478840 HDHD3Q9BSH5 251 aaPredicted RBP3.42□□□□□ -1.86
UPF3B-203ENST00000478840 MAP1LC3CQ9BXW4 147 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 RPP21Q9H633 154 aaKnown RBP3.42□□□□□ -1.86
UPF3B-203ENST00000478840 MED4Q9NPJ6 270 aa3.42□□□□□ -1.86
UPF3B-203ENST00000478840 PINLYPA6NC86 204 aa3.41□□□□□ -1.86
UPF3B-203ENST00000478840 INS-IGF2F8WCM5 200 aa3.41□□□□□ -1.86
UPF3B-203ENST00000478840 YKT6O15498 198 aa3.41□□□□□ -1.86
UPF3B-203ENST00000478840 SLC16A7O60669 478 aa3.41□□□□□ -1.86
UPF3B-203ENST00000478840 PLEKHA8P1O95397 391 aa3.41□□□□□ -1.86
UPF3B-203ENST00000478840 APOA1P02647 267 aa3.41□□□□□ -1.86
UPF3B-203ENST00000478840 HLA-DPB1P04440 258 aa3.41□□□□□ -1.86
UPF3B-203ENST00000478840 HOXA9P31269 272 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms