RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 COQ3Q9NZJ6 369 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 COPS3Q9UNS2 423 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 K7EPK0 472 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 ZFPL1O95159 310 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 GLI4P10075 376 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 ZNF121P58317 390 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-208ENST00000478423 INSL4Q14641 139 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 SSX1Q16384 188 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 FAAP20Q6NZ36 180 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 FAM71E2Q8N5Q1 922 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 SULT4A1Q9BR01 284 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 ZNF436Q9C0F3 470 aaPredicted RBP12.81□□□□□ -0.36
NPHP4-208ENST00000478423 LTBP1Q14766 1721 aa12.81□□□□□ -0.36
NPHP4-208ENST00000478423 GPR137BO60478 399 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 NTN1O95631 604 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 CDKN2AP42771 156 aaKnown RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 SLC25A1P53007 311 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 CAMK2BQ13554 666 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 IAH1Q2TAA2 248 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 PAN3Q58A45 887 aaKnown RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 ACER2Q5QJU3 275 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 APH1BQ8WW43 257 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 SRRQ9GZT4 340 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 RBM38Q9H0Z9 239 aaKnown RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 CCL4P13236 92 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 OMGP23515 440 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 EIF3IQ13347 325 aaKnown RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 PHLDA2Q53GA4 152 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 ZNF610Q8N9Z0 462 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 TMEM52Q8NDY8 209 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 IGKV1-8A0A0C4DH67 115 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 A0A1B0GTQ1 180 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 TOX3O15405 576 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 ALOX5APP20292 161 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 MFGE8Q08431 387 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 PLGLAQ15195 96 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 TSC22D1Q15714 1073 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 CD276Q5ZPR3 534 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 RHOUQ7L0Q8 258 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 D2HGDHQ8N465 521 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 OR11L1Q8NGX0 322 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 PAQR8Q8TEZ7 354 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 IL2RAP01589 272 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 GZMMP51124 257 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 CATR1Q13166 79 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 TOMM34Q15785 309 aaPredicted RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 BTLAQ7Z6A9 289 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 AKR7LQ8NHP1 331 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 EMG1Q92979 244 aaKnown RBP12.8□□□□□ -0.36
NPHP4-208ENST00000478423 LRP12Q9Y561 859 aa12.8□□□□□ -0.36
NPHP4-208ENST00000478423 TRAV1-2A0A0B4J238 106 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 CEBPZOSA8MTT3 80 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 PATE3B3GLJ2 98 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 NRASP01111 189 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 IFNA17P01571 189 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 EDDM3BP56851 147 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 RAB31Q13636 194 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 MSMO1Q15800 293 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 C1QL3Q5VWW1 255 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 FJX1Q86VR8 437 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 OR11G2Q8NGC1 345 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 MAFIPQ8WZ33 124 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 UNKLQ9H9P5 680 aaKnown RBP12.79□□□□□ -0.36
NPHP4-208ENST00000478423 FLRT3Q9NZU0 649 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 B3GAT1Q9P2W7 334 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 EXO1Q9UQ84 846 aaKnown RBP12.79□□□□□ -0.36
NPHP4-208ENST00000478423 SPTBN1Q01082 2364 aaKnown RBP12.79□□□□□ -0.36
NPHP4-208ENST00000478423 A0A0D9SG52 128 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 GPANK1O95872 356 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 OPRM1P35372 400 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 HOXD12P35452 270 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 CRYBB2P43320 205 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 ZNF169Q14929 603 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-208ENST00000478423 LAIR1Q6GTX8 287 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 LPCAT3Q6P1A2 487 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 RFPL4BQ6ZWI9 263 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 GABRG1Q8N1C3 465 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 OR4D6Q8NGJ1 314 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 INTS12Q96CB8 462 aaKnown RBP12.79□□□□□ -0.36
NPHP4-208ENST00000478423 TRIB1Q96RU8 372 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 DDOQ99489 341 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 IER2Q9BTL4 223 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 MFRPQ9BY79 579 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 AUNIPQ9H7T9 357 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.79□□□□□ -0.363e-6■■■■□ 23.4
NPHP4-208ENST00000478423 UFSP2Q9NUQ7 469 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 PHF1O43189 567 aaPredicted RBP12.79□□□□□ -0.36
NPHP4-208ENST00000478423 WNT11O96014 354 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 TIGD3Q6B0B8 471 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 SLC16A12Q6ZSM3 486 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 MDGA2Q7Z553 956 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 NOXO1Q8NFA2 376 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 OR51A2Q8NGJ7 313 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 ZC3HAV1LQ96H79 300 aaKnown RBP12.79□□□□□ -0.36
NPHP4-208ENST00000478423 ZNF649Q9BS31 505 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 OCIAD1Q9NX40 245 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 PTPRFP10586 1907 aa12.79□□□□□ -0.36
NPHP4-208ENST00000478423 MPPED1O15442 326 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 FOXS1O43638 330 aa12.78□□□□□ -0.36
NPHP4-208ENST00000478423 OR1C1Q15619 314 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms