RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 GIPC3Q8TF64 312 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 CCL17Q92583 94 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 RAB1CQ92928 201 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 MAP6Q96JE9 813 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 PITX2Q99697 317 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 ATF6BQ99941 703 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 NIPSNAP1Q9BPW8 284 aa18.42■□□□□ 0.54
COL9A3-211ENST00000477612 DEAF1O75398 565 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-211ENST00000477612 HLA-DQA2P01906 255 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 MSMBP08118 114 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 ZNF823P16415 610 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 PYCR1P32322 319 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 ERFP50548 548 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 MVKQ03426 396 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 AVPI1Q5T686 147 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 IL17RELQ6ZVW7 336 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 CXXC5Q7LFL8 322 aaKnown RBP18.41■□□□□ 0.54
COL9A3-211ENST00000477612 GLCCI1Q86VQ1 547 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 TIMD4Q96H15 378 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 FEVQ99581 238 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 PTTG3PQ9NZH4 202 aa18.41■□□□□ 0.54
COL9A3-211ENST00000477612 A0A1B0GWJ7 208 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 TCRBV3S1A0A5B6 114 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 IQCF6A8MYZ5 107 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 SOX14O95416 240 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 ANPEPP15144 967 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 TNFRSF1AP19438 455 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 TNFSF4P23510 183 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 CRMP1Q14194 572 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 HLXQ14774 488 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-211ENST00000477612 TEX30Q5JUR7 227 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 TMEM179BQ7Z7N9 219 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 PAPD5Q8NDF8 572 aaKnown RBP18.4■□□□□ 0.54
COL9A3-211ENST00000477612 PROKR2Q8NFJ6 384 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 OR8G5Q8NG78 346 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 OR10S1Q8NGN2 331 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 TMEM186Q96B77 213 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 ZNF665Q9H7R5 613 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 CMC2Q9NRP2 79 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 DDX28Q9NUL7 540 aaKnown RBP18.4■□□□□ 0.54
COL9A3-211ENST00000477612 ARMC1Q9NVT9 282 aa18.4■□□□□ 0.54
COL9A3-211ENST00000477612 WNK2Q9Y3S1 2297 aa18.39■□□□□ 0.54
COL9A3-211ENST00000477612 SURF4O15260 269 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 DNAJC8O75937 253 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-211ENST00000477612 IGHV2-5P01817 119 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 OTX1P32242 354 aaPredicted RBP18.39■□□□□ 0.53
COL9A3-211ENST00000477612 ZNF283Q8N7M2 679 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 OR2Z1Q8NG97 314 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 OR51F2Q8NH61 342 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 RAB39BQ96DA2 213 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 POMPQ9Y244 141 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 COMMD3-BMI1R4GMX3 469 aa18.39■□□□□ 0.53
COL9A3-211ENST00000477612 ARHGAP32A7KAX9 2087 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 TVP23AA6NH52 213 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 F5H5K5 113 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 IFNGP01579 166 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 SPI1P17947 270 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 FMO3P31513 532 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 GRK5P34947 590 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 BLVRAP53004 296 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 TPTEP56180 551 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 FLOT2Q14254 428 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 OR2T2Q6IF00 324 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 ACSM5Q6NUN0 579 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 SLC27A4Q6P1M0 643 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 NAA40Q86UY6 237 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 OR51L1Q8NGJ5 315 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 OR9Q1Q8NGQ5 310 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 OR13G1Q8NGZ3 307 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 SPATA3Q8NHX4 192 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 SLC30A2Q9BRI3 323 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 WDR76Q9H967 626 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 TMEM106BQ9NUM4 274 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 HIF1ANQ9NWT6 349 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 NPTNQ9Y639 398 aa18.38■□□□□ 0.53
COL9A3-211ENST00000477612 TRAV20A0A0B4J274 112 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 GSC2O15499 205 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 PSKH1P11801 424 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 SELEP16581 610 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 RPS27P42677 84 aaKnown RBP18.37■□□□□ 0.53
COL9A3-211ENST00000477612 ENTPD1P49961 510 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 BNIP1Q12981 228 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 LINC01590Q5TEZ4 76 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 LYPD4Q6UWN0 246 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 PEG10Q86TG7 708 aaKnown RBP18.37■□□□□ 0.53
COL9A3-211ENST00000477612 TEX47Q8TBZ9 253 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 ITLN1Q8WWA0 313 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 ZNF582Q96NG8 517 aaPredicted RBP18.37■□□□□ 0.53
COL9A3-211ENST00000477612 YY1AP1Q9H869 796 aa18.37■□□□□ 0.53
COL9A3-211ENST00000477612 M0R135 149 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 GNGT2O14610 69 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 IGHV2-70P01814 119 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 ZNF3P17036 446 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 GK2Q14410 553 aaPredicted RBP18.36■□□□□ 0.53
COL9A3-211ENST00000477612 DOCK11Q5JSL3 2073 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 SPATA24Q86W54 205 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 OR5AS1Q8N127 324 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 ZNF511Q8NB15 262 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 SPTSSAQ969W0 71 aa18.36■□□□□ 0.53
COL9A3-211ENST00000477612 ZNF799Q96GE5 643 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms