RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 ATP6V1E1P36543 226 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 PPP1CBP62140 327 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 MVKQ03426 396 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 IL18R1Q13478 541 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 TAF13Q15543 124 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 SNAI3Q3KNW1 292 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 ZNF322Q6U7Q0 402 aaPredicted RBP13.64□□□□□ -0.23
COPS3-207ENST00000477299 THAP5Q7Z6K1 395 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 OR52I1Q8NGK6 324 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 MARS2Q96GW9 593 aaKnown RBP13.64□□□□□ -0.23
COPS3-207ENST00000477299 KCNJ15Q99712 375 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 SYT3Q9BQG1 590 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 VCX3BQ9H321 246 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 ELOVL3Q9HB03 270 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 BRD7Q9NPI1 651 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 ZNF319Q9P2F9 582 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 LRP12Q9Y561 859 aa13.64□□□□□ -0.23
COPS3-207ENST00000477299 ANKRD17O75179 2603 aaKnown RBP13.63□□□□□ -0.23
COPS3-207ENST00000477299 CSMD1Q96PZ7 3565 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 M0R135 149 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ATE1O95260 518 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 LCATP04180 440 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 H2BFMP0C1H6 154 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 CD53P19397 219 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 PCSK6P29122 969 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 CDKN1AP38936 164 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ECH1Q13011 328 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 TMED1Q13445 227 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 HLXQ14774 488 aaPredicted RBP13.63□□□□□ -0.23
COPS3-207ENST00000477299 SNCBQ16143 134 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 COLCA1Q6ZS62 124 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ZCCHC24Q8N2G6 241 aaKnown RBP13.63□□□□□ -0.23
COPS3-207ENST00000477299 MUC15Q8N387 334 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ZNF283Q8N7M2 679 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 SETD9Q8NE22 299 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 SGCDQ92629 289 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 GTF3AQ92664 365 aaKnown RBP13.63□□□□□ -0.23
COPS3-207ENST00000477299 GGHQ92820 318 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ZNF799Q96GE5 643 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 Q96MT0 163 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 OR8B4Q96RC9 309 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ZNF649Q9BS31 505 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 TRAF4Q9BUZ4 470 aaPredicted RBP13.63□□□□□ -0.23
COPS3-207ENST00000477299 PTTG3PQ9NZH4 202 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 EIF3KQ9UBQ5 218 aaKnown RBP13.63□□□□□ -0.23
COPS3-207ENST00000477299 MRM2Q9UI43 246 aaKnown RBP13.63□□□□□ -0.23
COPS3-207ENST00000477299 ATPIF1Q9UII2 106 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ST6GALNAC2Q9UJ37 374 aa13.63□□□□□ -0.23
COPS3-207ENST00000477299 ARID1AO14497 2285 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 ZNF670-ZNF695F2Z2N8 137 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 ICMTO60725 284 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 NDUFS7O75251 213 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 PNPP00491 289 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 OR2T7P0C7T2 308 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 MYF6P23409 242 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 SERPINF1P36955 418 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 RAD52P43351 418 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 SLC15A1P46059 708 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 CX3CR1P49238 355 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 TPTEP56180 551 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 SWI5Q1ZZU3 235 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 ZNF684Q5T5D7 378 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 C11orf71Q6IPW1 123 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 RGS7BPQ6MZT1 257 aaPredicted RBP13.62□□□□□ -0.23
COPS3-207ENST00000477299 PAMR1Q6UXH9 720 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 PRSS45Q7RTY3 260 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 KRT77Q7Z794 578 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 LHFPL3Q86UP9 236 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 OR2T27Q8NH04 317 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 OR2AE1Q8NHA4 323 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 MRPL24Q96A35 216 aaKnown RBP13.62□□□□□ -0.23
COPS3-207ENST00000477299 C1QTNF5Q9BXJ0 243 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 ZNF442Q9H7R0 627 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 TBCCD1Q9NVR7 557 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 DUSP13Q9UII6 198 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 IKZF2Q9UKS7 526 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 CMAHPQ9Y471 501 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 SPEF1Q9Y4P9 236 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 HSPE1-MOB4S4R3N1 261 aa13.62□□□□□ -0.23
COPS3-207ENST00000477299 ZNF250P15622 560 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 HSD11B1P28845 292 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 SLC6A9P48067 706 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 ZNF121P58317 390 aaPredicted RBP13.61□□□□□ -0.23
COPS3-207ENST00000477299 MFGE8Q08431 387 aaPredicted RBP13.61□□□□□ -0.23
COPS3-207ENST00000477299 TP53I3Q53FA7 332 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 ZNF544Q6NX49 715 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 FAM57BQ71RH2 274 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 DTX2Q86UW9 622 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.61□□□□□ -0.23
COPS3-207ENST00000477299 FBXL14Q8N1E6 418 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 BPIFB6Q8NFQ5 453 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 KLF14Q8TD94 323 aaPredicted RBP13.61□□□□□ -0.23
COPS3-207ENST00000477299 IPCEF1Q8WWN9 437 aaPredicted RBP13.61□□□□□ -0.23
COPS3-207ENST00000477299 SPTSSAQ969W0 71 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 RNF166Q96A37 237 aaPredicted RBP13.61□□□□□ -0.23
COPS3-207ENST00000477299 CNBD2Q96M20 576 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 DCLRE1CQ96SD1 692 aaKnown RBP13.61□□□□□ -0.23
COPS3-207ENST00000477299 DOK1Q99704 481 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 SOX7Q9BT81 388 aa13.61□□□□□ -0.23
COPS3-207ENST00000477299 ANKRD60Q9BZ19 345 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms