RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 SIGLEC5O15389 551 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ATP8B1O43520 1251 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SPRY3O43610 288 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 NARSO43776 548 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SSNA1O43805 119 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PRKYO43930 277 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 DUSP11O75319 330 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 EEDO75530 441 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 LYPD3O95274 346 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 LYPLA2O95372 231 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SNAP29O95721 258 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SERPINA5P05154 406 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CALB1P05937 261 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CDK1P06493 297 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 C8orf88P0DMB2 117 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CALM1P0DP23 149 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CALM2P0DP24 149 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CALM3P0DP25 149 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SLC2A2P11168 524 aaPredicted RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF35P13682 527 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 MYOGP15173 224 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 JUNBP17275 347 aaPredicted RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CELP19835 753 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 IDSP22304 550 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 NTSP30990 170 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 GPR183P32249 361 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 COILP38432 576 aaPredicted RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 MAGEA12P43365 314 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 OMPP47874 163 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CAV2P51636 162 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PRKXP51817 358 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CRISP1P54107 249 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 XGP55808 180 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 RND3P61587 244 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 BTG1P62324 171 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 RPL8P62917 257 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SSBP2P81877 361 aaPredicted RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 RPL24P83731 157 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 BCL2L1Q07817 233 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 C2orf54Q08AI8 447 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ST3GAL4Q11206 333 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CDC20Q12834 499 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ELAVL2Q12926 359 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ASAH1Q13510 395 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 TFDP2Q14188 446 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 GABRA6Q16445 453 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CCL15Q16663 113 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM176BQ3YBM2 270 aaPredicted RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ACSM3Q53FZ2 586 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SPIN3Q5JUX0 258 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ACTL10Q5JWF8 245 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 IRAK1BP1Q5VVH5 260 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 OR5M10Q6IEU7 315 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 NIPAL1Q6NVV3 410 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ZNF585AQ6P3V2 769 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 DNM1P34Q6PK57 102 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SLC25A47Q6Q0C1 308 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 DRAM2Q6UX65 266 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 GFRALQ6UXV0 394 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 C3P1Q6ZMU1 363 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 CBLL1Q75N03 491 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PGAP1Q75T13 922 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 GDPD3Q7L5L3 318 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 BHLHA9Q7RTU4 235 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM135Q86UB9 458 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 TMEM219Q86XT9 240 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 TRAPPC5Q8IUR0 188 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 KIRREL3Q8IZU9 778 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 VKORC1L1Q8N0U8 176 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ZFP82Q8N141 532 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PDIK1LQ8N165 341 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 MREGQ8N565 214 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 OR2L5Q8NG80 312 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 OR51F2Q8NH61 342 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 OR1L3Q8NH93 324 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 MPLKIPQ8TAP9 179 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PIGXQ8TBF5 258 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 RNASEH2CQ8TDP1 164 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PCNPQ8WW12 178 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 APOBEC4Q8WW27 367 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 AP3S1Q92572 193 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 NTAN1Q96AB6 310 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 RCN3Q96D15 328 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 C20orf173Q96LM9 149 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PACRGQ96M98 296 aaPredicted RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 OXGR1Q96P68 337 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 HBEGFQ99075 208 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SORT1Q99523 831 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 TSNAXQ99598 290 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 EPYCQ99645 322 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 NEUROG2Q9H2A3 272 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 C12orf10Q9HB07 376 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 BEX1Q9HBH7 125 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 PLAC1Q9HBJ0 212 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 EML4Q9HC35 981 aaKnown RBP2.44□□□□□ -2.02
HMGN4-202ENST00000477243 ESM1Q9NQ30 184 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 SLC2A9Q9NRM0 540 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 AGPAT4Q9NRZ5 378 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 VNN3Q9NY84 501 aa2.44□□□□□ -2.02
HMGN4-202ENST00000477243 EHFQ9NZC4 300 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms