RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 SHQ1Q6PI26 577 aaKnown RBP8.69□□□□□ -1.02
CCM2-208ENST00000476594 FBXW12Q6X9E4 464 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 LINC00346Q8IVM7 164 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 ADGRG5Q8IZF4 528 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 CYB561A3Q8NBI2 242 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 SLC37A3Q8NCC5 494 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 OR13G1Q8NGZ3 307 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 ST7LQ8TDW4 575 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 CANT1Q8WVQ1 401 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 C1orf159Q96HA4 380 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 PLEKHA8Q96JA3 519 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 CLPTM1LQ96KA5 538 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 GAL3ST1Q99999 423 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 PRRG3Q9BZD7 231 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 MMADHCQ9H3L0 296 aaPredicted RBP8.69□□□□□ -1.02
CCM2-208ENST00000476594 FN3KQ9H479 309 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 OPA3Q9H6K4 179 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 NARFLQ9H6Q4 476 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 MSL2Q9HCI7 577 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 CMC2Q9NRP2 79 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 PTTG3PQ9NZH4 202 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 DNAJB9Q9UBS3 223 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 TMEFF2Q9UIK5 374 aaPredicted RBP8.69□□□□□ -1.02
CCM2-208ENST00000476594 STARD10Q9Y365 291 aa8.69□□□□□ -1.02
CCM2-208ENST00000476594 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 ZSCAN5BA6NJL1 495 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 ZNF878C9JN71 531 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 M0R135 149 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 LCATP04180 440 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 HMGN1P05114 100 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 MSMBP08118 114 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 THBS2P35442 1172 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 ENTPD1P49961 510 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 CBX1P83916 185 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 MVKQ03426 396 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 PPP1R8Q12972 351 aaKnown RBP8.68□□□□□ -1.02
CCM2-208ENST00000476594 CDK5R2Q13319 367 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 CRMP1Q14194 572 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 CR1LQ2VPA4 569 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 CORO6Q6QEF8 472 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 DRAM2Q6UX65 266 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 PGAP1Q75T13 922 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 SHFQ7M4L6 423 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 MRPL21Q7Z2W9 205 aaKnown RBP8.68□□□□□ -1.02
CCM2-208ENST00000476594 PRIMA1Q86XR5 153 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 C1orf87Q8N0U7 546 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 SPICQ8N5J4 248 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 ATG16L2Q8NAA4 619 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 OR8G5Q8NG78 346 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 OR2Z1Q8NG97 314 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 OR6K6Q8NGW6 343 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 SLC7A6Q92536 515 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 OTULINQ96BN8 352 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 ZNF799Q96GE5 643 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 FEVQ99581 238 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 COPS4Q9BT78 406 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 C1QTNF5Q9BXJ0 243 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 PLA2G12AQ9BZM1 189 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 SLC22A4Q9H015 551 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 ZNF665Q9H7R5 613 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 ARMC1Q9NVT9 282 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 PDP1Q9P0J1 537 aaPredicted RBP8.68□□□□□ -1.02
CCM2-208ENST00000476594 ENOPH1Q9UHY7 261 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 PCDHB10Q9UN67 800 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 PPP1R3CQ9UQK1 317 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 WIPI2Q9Y4P8 454 aa8.68□□□□□ -1.02
CCM2-208ENST00000476594 LRRC30A6NM36 301 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 IQCF6A8MYZ5 107 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 PRR23D1E9PI22 279 aaPredicted RBP8.67□□□□□ -1.02
CCM2-208ENST00000476594 FKBP6O75344 327 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 GPANK1O95872 356 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 DBHP09172 617 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 SPARCP09486 303 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 ACSM4P0C7M7 580 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 PRR23D2P0DMB1 279 aaPredicted RBP8.67□□□□□ -1.02
CCM2-208ENST00000476594 IRF2P14316 349 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 SPI1P17947 270 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 GATA3P23771 443 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 POU1F1P28069 291 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 HSD11B1P28845 292 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 PYCR1P32322 319 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 GGT2P36268 569 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 GRB2P62993 217 aaKnown RBP8.67□□□□□ -1.02
CCM2-208ENST00000476594 MZT1Q08AG7 82 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 AVPI1Q5T686 147 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 CFAP77Q6ZQR2 320 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 DCXRQ7Z4W1 244 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 MUC20Q8N307 709 aaPredicted RBP8.67□□□□□ -1.02
CCM2-208ENST00000476594 KLHL36Q8N4N3 616 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 OR8D4Q8NGM9 314 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 OR9Q1Q8NGQ5 310 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 SPRYD4Q8WW59 207 aaPredicted RBP8.67□□□□□ -1.02
CCM2-208ENST00000476594 TMEM158Q8WZ71 300 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 GTF3AQ92664 365 aaKnown RBP8.67□□□□□ -1.02
CCM2-208ENST00000476594 TMEM186Q96B77 213 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 NRBF2Q96F24 287 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 NIPSNAP1Q9BPW8 284 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 RBM4Q9BWF3 364 aaKnown RBP8.67□□□□□ -1.02
CCM2-208ENST00000476594 TOR3AQ9H497 397 aa8.67□□□□□ -1.02
CCM2-208ENST00000476594 DDX28Q9NUL7 540 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms