RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 CYB5R1Q9UHQ9 305 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 STARD10Q9Y365 291 aa13.77□□□□□ -0.21
COL1A1-205ENST00000476387 ANK2Q01484 3957 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 IGHV1-69-2A0A0G2JMI3 117 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 ZSCAN5BA6NJL1 495 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 CDC14BO60729 498 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 IGHV1-46P01743 117 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 MSMBP08118 114 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 PSG7Q13046 419 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 TMEM255AQ5JRV8 349 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 USP51Q70EK9 711 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 TMEM179BQ7Z7N9 219 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 OR51L1Q8NGJ5 315 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 DIRC2Q96SL1 478 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 RBM4Q9BWF3 364 aaKnown RBP13.76□□□□□ -0.21
COL1A1-205ENST00000476387 CMC2Q9NRP2 79 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 MRPL22Q9NWU5 206 aaKnown RBP13.76□□□□□ -0.21
COL1A1-205ENST00000476387 KIF17Q9P2E2 1029 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 ZDHHC8Q9ULC8 765 aa13.76□□□□□ -0.21
COL1A1-205ENST00000476387 DYSFO75923 2080 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 TVP23AA6NH52 213 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 TCF21O43680 179 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 DEAF1O75398 565 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-205ENST00000476387 GYPBP06028 91 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 TNFSF4P23510 183 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 POU1F1P28069 291 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 FMO3P31513 532 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 GRK5P34947 590 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 GGT2P36268 569 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 CRYBB2P43320 205 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 SLC25A1P53007 311 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 LMO4P61968 165 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 HFEQ30201 348 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 ZNF362Q5T0B9 420 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-205ENST00000476387 IQCF1Q8N6M8 205 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 PAPD5Q8NDF8 572 aaKnown RBP13.75□□□□□ -0.21
COL1A1-205ENST00000476387 OR6K6Q8NGW6 343 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 OR51F2Q8NH61 342 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 TMEM186Q96B77 213 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 CMBLQ96DG6 245 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 DDOQ99489 341 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 MMADHCQ9H3L0 296 aaPredicted RBP13.75□□□□□ -0.21
COL1A1-205ENST00000476387 NARFLQ9H6Q4 476 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 MSL2Q9HCI7 577 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 PTTG3PQ9NZH4 202 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 PURGQ9UJV8 347 aaKnown RBP13.75□□□□□ -0.21
COL1A1-205ENST00000476387 COMMD3-BMI1R4GMX3 469 aa13.75□□□□□ -0.21
COL1A1-205ENST00000476387 FAM157AC9JC47 383 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 CLDN25C9JDP6 229 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 F5H5K5 113 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 WNT9BO14905 357 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 ADH4P08319 380 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 SPARCP09486 303 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 ANXA8P13928 327 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 RAC2P15153 192 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 SPI1P17947 270 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 KITLGP21583 273 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 PAICSP22234 425 aaKnown RBP13.74□□□□□ -0.21
COL1A1-205ENST00000476387 ENTPD1P49961 510 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 BLVRAP53004 296 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 SLC27A4Q6P1M0 643 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 HS3ST5Q8IZT8 346 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 ATG16L2Q8NAA4 619 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 PTP4A1Q93096 173 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 OTULINQ96BN8 352 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 TIMD4Q96H15 378 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 HIF1ANQ9NWT6 349 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 TREM2Q9NZC2 230 aa13.74□□□□□ -0.21
COL1A1-205ENST00000476387 TIPRLO75663 272 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 ANPEPP15144 967 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 RPS27P42677 84 aaKnown RBP13.73□□□□□ -0.21
COL1A1-205ENST00000476387 TPTEP56180 551 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 TNFAIP6P98066 277 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-205ENST00000476387 SRSF2Q01130 221 aaKnown RBP13.73□□□□□ -0.21
COL1A1-205ENST00000476387 SCGB2A2Q13296 93 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 HLXQ14774 488 aaPredicted RBP13.73□□□□□ -0.21
COL1A1-205ENST00000476387 C1orf146Q5VVC0 180 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 LYPD4Q6UWN0 246 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 FBXW12Q6X9E4 464 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 OR2Z1Q8NG97 314 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 DNAJC9Q8WXX5 260 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 SPTSSAQ969W0 71 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 SLCO4A1Q96BD0 722 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 HAVCR1Q96D42 359 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 TEX12Q9BXU0 123 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 NMNAT2Q9BZQ4 307 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 METRNQ9UJH8 293 aa13.73□□□□□ -0.21
COL1A1-205ENST00000476387 NBEAL1Q6ZS30 2694 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 A0A0A6YYJ9 748 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 TRAV20A0A0B4J274 112 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 M0R135 149 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 CIB2O75838 187 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 LCATP04180 440 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 CD55P08174 381 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 ACSM4P0C7M7 580 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 CLUP10909 449 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 OSMP13725 252 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 SLC6A9P48067 706 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 SLC3A1Q07837 685 aa13.72□□□□□ -0.21
COL1A1-205ENST00000476387 MALLQ13021 153 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms