RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 KIR2DS1A0A191URI9 304 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 MDFIC2A0A1B0GVS7 189 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 POM121CA8CG34 1229 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 F5H5P2 479 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 SOCS2O14508 198 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 SELEP16581 610 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 SRP9P49458 86 aaKnown RBP10.94□□□□□ -0.66
MRPL55-228ENST00000476267 SLC7A2P52569 658 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 RAD23AP54725 363 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 MAB21L1Q13394 359 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 MEP1BQ16820 701 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 FAM201AQ5SY85 155 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 DPY19L2P2Q6ZN68 376 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 MOGAT3Q86VF5 341 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 FITM2Q8N6M3 262 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 ATG16L2Q8NAA4 619 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 GJC3Q8NFK1 279 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 OR5L1Q8NGL2 311 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 Q8TCH9 128 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 NEIL1Q96FI4 390 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-228ENST00000476267 RSRC1Q96IZ7 334 aaKnown RBP10.94□□□□□ -0.66
MRPL55-228ENST00000476267 C7orf34Q96L11 122 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 DHRS1Q96LJ7 313 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 ZNF582Q96NG8 517 aaPredicted RBP10.94□□□□□ -0.66
MRPL55-228ENST00000476267 TSSK2Q96PF2 358 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 SLITRK2Q9H156 845 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 NDUFAF4Q9P032 175 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 IER3IP1Q9Y5U9 82 aa10.94□□□□□ -0.66
MRPL55-228ENST00000476267 TRBV4-1A0A0J9YWV2 114 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 PPP1R3DO95685 299 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 H1F0P07305 194 aaKnown RBP10.93□□□□□ -0.66
MRPL55-228ENST00000476267 COX4I1P13073 169 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 MDKP21741 143 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-228ENST00000476267 PSMB10P40306 273 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 MTNR1AP48039 350 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 GNB2P62879 340 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 DBPQ10586 325 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-228ENST00000476267 CLEC12AQ5QGZ9 265 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 PGM2L1Q6PCE3 622 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 TREML4Q6UXN2 200 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 CFAP77Q6ZQR2 320 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 FKBP9P1Q75LS8 142 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 CELF2-AS1Q8N7Q2 184 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 BHLHE23Q8NDY6 225 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 SLC26A10Q8NG04 563 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 HOPXQ9BPY8 73 aaPredicted RBP10.93□□□□□ -0.66
MRPL55-228ENST00000476267 NDEL1Q9GZM8 345 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 RERGLQ9H628 205 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 PNRC2Q9NPJ4 139 aaKnown RBP10.93□□□□□ -0.66
MRPL55-228ENST00000476267 ABCD2Q9UBJ2 740 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 MMP24Q9Y5R2 645 aa10.93□□□□□ -0.66
MRPL55-228ENST00000476267 PRKDCP78527 4128 aaKnown RBP10.92□□□□□ -0.66
MRPL55-228ENST00000476267 IGHV3-64DA0A0J9YX35 117 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 PTBP3O95758 552 aaKnown RBP10.92□□□□□ -0.66
MRPL55-228ENST00000476267 HLA-DPB1P04440 258 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 ACSM4P0C7M7 580 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 NCK1P16333 377 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 ANOS1P23352 680 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 CD200P41217 278 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 PITPNBP48739 271 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 RPS6KA3P51812 740 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 PRSS12P56730 875 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 GK2Q14410 553 aaPredicted RBP10.92□□□□□ -0.66
MRPL55-228ENST00000476267 SLC18B1Q6NT16 456 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 CORO6Q6QEF8 472 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 LYPD2Q6UXB3 125 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 BTNL3Q6UXE8 466 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 HACD2Q6Y1H2 254 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 DCDC5Q6ZRR9 648 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 RRM2BQ7LG56 351 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 ZBTB46Q86UZ6 589 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 CYP4Z1Q86W10 505 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 OR6V1Q8N148 313 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 FAM86B1Q8N7N1 296 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 NUDT16L1Q9BRJ7 211 aaKnown RBP10.92□□□□□ -0.66
MRPL55-228ENST00000476267 CDADC1Q9BWV3 514 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 CCDC134Q9H6E4 229 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 WDR76Q9H967 626 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 B9D1Q9UPM9 204 aa10.92□□□□□ -0.66
MRPL55-228ENST00000476267 UNC119BA6NIH7 251 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 C22orf46C9J442 243 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 PHYHO14832 338 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 TNFRSF13BO14836 293 aaPredicted RBP10.91□□□□□ -0.66
MRPL55-228ENST00000476267 ARPC3O15145 178 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 GSTA4O15217 222 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 HOXA3O43365 443 aaPredicted RBP10.91□□□□□ -0.66
MRPL55-228ENST00000476267 SEMG1P04279 462 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 RHCEP18577 417 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 FPR3P25089 353 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 CRABP1P29762 137 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 GGT2P36268 569 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 HOXA4Q00056 320 aaPredicted RBP10.91□□□□□ -0.66
MRPL55-228ENST00000476267 OCLNQ16625 522 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 DEFB112Q30KQ8 113 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 PDLIM3Q53GG5 364 aaPredicted RBP10.91□□□□□ -0.66
MRPL55-228ENST00000476267 WDR25Q64LD2 544 aaPredicted RBP10.91□□□□□ -0.66
MRPL55-228ENST00000476267 C16orf87Q6PH81 154 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 SMARCD3Q6STE5 483 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 BRD3OSQ6XYD6 125 aa10.91□□□□□ -0.66
MRPL55-228ENST00000476267 NAA40Q86UY6 237 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms