RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 OR2T1O43869 369 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 B3GALNT1O75752 331 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 INMTO95050 263 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 PTBP3O95758 552 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 ALDOBP05062 364 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 IL7RP16871 459 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 IMPDH1P20839 514 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ANOS1P23352 680 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 PRKAR1BP31321 381 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 CD200P41217 278 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 SERPINB8P50452 374 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ARHGDIAP52565 204 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 PRKAA2P54646 552 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 MRPS25P82663 173 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 EWSR1Q01844 656 aaKnown RBP eCLIP3.75□□□□□ -1.81
USP4-209ENST00000475873 FMODQ06828 376 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ENDOGQ14249 297 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 OR8B8Q15620 311 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 LSM12Q3MHD2 195 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 PDCD4Q53EL6 469 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 C10orf128Q5T292 105 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ASPHD1Q5U4P2 390 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 TEX36Q5VZQ5 186 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 FBXW12Q6X9E4 464 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 LCNL1Q6ZST4 164 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ZNF572Q7Z3I7 529 aaPredicted RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 RANBP3LQ86VV4 465 aaPredicted RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 MKXQ8IYA7 352 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ZNF440Q8IYI8 595 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 CMTM4Q8IZR5 234 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 LILRB2Q8N423 598 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 NPEPL1Q8NDH3 523 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 OR5M8Q8NGP6 311 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 IL17DQ8TAD2 202 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 SLC38A4Q969I6 547 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ZNF566Q969W8 418 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 MOAP1Q96BY2 351 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 L3HYPDHQ96EM0 354 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 SLC25A44Q96H78 314 aaPredicted RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 METTL2AQ96IZ6 378 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 DHRS1Q96LJ7 313 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 TRNT1Q96Q11 434 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 SH3GL1Q99961 368 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 WACQ9BTA9 647 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 WDR76Q9H967 626 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 SIAEQ9HAT2 523 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ELL3Q9HB65 397 aaPredicted RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 CCNB1IP1Q9NPC3 277 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 VNN3Q9NY84 501 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 TAS2R5Q9NYW4 299 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 ADA2Q9NZK5 511 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 SF3B6Q9Y3B4 125 aaKnown RBP3.75□□□□□ -1.81
USP4-209ENST00000475873 DNAH5Q8TE73 4624 aa3.75□□□□□ -1.81
USP4-209ENST00000475873 TRAV38-1A0A0B4J264 116 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 EXOC1LA0A1B0GW35 172 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 A0A1B0GWA3 101 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 FAM90A22PA8MWA6 464 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 A8MZ25 164 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 PGRMC1O00264 195 aaKnown RBP3.74□□□□□ -1.81
USP4-209ENST00000475873 CFLARO15519 480 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 NDUFA2O43678 99 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 ENTPD5O75356 428 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 DBIP07108 87 aaKnown RBP3.74□□□□□ -1.81
USP4-209ENST00000475873 DBHP09172 617 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 IRF2P14316 349 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 GP9P14770 177 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 UQCRBP14927 111 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 FPR3P25089 353 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 LAP3P28838 519 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 CHI3L1P36222 383 aaPredicted RBP3.74□□□□□ -1.81
USP4-209ENST00000475873 HPCAL1P37235 193 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 TGM4P49221 684 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 GP2P55259 537 aaKnown RBP3.74□□□□□ -1.81
USP4-209ENST00000475873 WDR4P57081 412 aaKnown RBP3.74□□□□□ -1.81
USP4-209ENST00000475873 IKZF1Q13422 519 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 FHL3Q13643 280 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 SGCAQ16586 387 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 SRSF7Q16629 238 aaKnown RBP eCLIP3.74□□□□□ -1.81
USP4-209ENST00000475873 PCK2Q16822 640 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 ABCA11PQ4W5N1 156 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 RABL3Q5HYI8 236 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 ATAD3BQ5T9A4 648 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 FAM27BQ5VT28 67 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 RNF220Q5VTB9 566 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 RNLSQ5VYX0 342 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 OTPQ5XKR4 325 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 OR4F3Q6IEY1 312 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 C1orf94Q6P1W5 598 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 UNQ6126/PRO20091Q6UXV3 157 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 LRRC74BQ6ZQY2 392 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 CCDC80Q76M96 950 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 NET1Q7Z628 596 aaPredicted RBP3.74□□□□□ -1.81
USP4-209ENST00000475873 ANKRD46Q86W74 232 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 ARMC8Q8IUR7 673 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 NUDCD3Q8IVD9 361 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 ZNF695Q8IW36 515 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 PEX5LQ8IYB4 626 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 Q8N1X5 172 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 CLDN22Q8N7P3 220 aa3.74□□□□□ -1.81
USP4-209ENST00000475873 CELF2-AS1Q8N7Q2 184 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms