RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 HIF1ANQ9NWT6 349 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 PLEK2Q9NYT0 353 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 TREM2Q9NZC2 230 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 ASH2LQ9UBL3 628 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 METRNQ9UJH8 293 aa12.92□□□□□ -0.34
VARS-223ENST00000474643 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.91□□□□□ -0.342e-7■■■□□ 18.6
VARS-223ENST00000474643 IGLV1-36A0A0B4J1U3 117 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 IGHV1-69-2A0A0G2JMI3 117 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 DCTN6O00399 190 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 NCR1O76036 304 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 MSMBP08118 114 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 OSMP13725 252 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 ZNF823P16415 610 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 PAICSP22234 425 aaKnown RBP12.91□□□□□ -0.34
VARS-223ENST00000474643 PYCR1P32322 319 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 GRK5P34947 590 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 HTR5AP47898 357 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 LSM6P62312 80 aaKnown RBP12.91□□□□□ -0.34
VARS-223ENST00000474643 SRSF2Q01130 221 aaKnown RBP12.91□□□□□ -0.34
VARS-223ENST00000474643 MVKQ03426 396 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 GINS1Q14691 196 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 MEP1BQ16820 701 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 ZMAT1Q5H9K5 638 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 AVPI1Q5T686 147 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 KDM4DQ6B0I6 523 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 SLC27A4Q6P1M0 643 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 TEX29Q8N6K0 151 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 OR9Q1Q8NGQ5 310 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 OR2AJ1Q8NGZ0 328 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 ABHD4Q8TB40 342 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 YIPF5Q969M3 257 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 EME1Q96AY2 570 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 RDH12Q96NR8 316 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 SEMA6AQ9H2E6 1030 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 ELOVL3Q9HB03 270 aa12.91□□□□□ -0.34
VARS-223ENST00000474643 PAPOLBQ9NRJ5 636 aaKnown RBP12.91□□□□□ -0.34
VARS-223ENST00000474643 NDRG4Q9ULP0 352 aaKnown RBP12.91□□□□□ -0.34
VARS-223ENST00000474643 ISPDA4D126 451 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 H0YJX3 145 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 SPRY3O43610 288 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 ALPLP05186 524 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 ESRRGP62508 458 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 DBPQ10586 325 aaPredicted RBP12.9□□□□□ -0.34
VARS-223ENST00000474643 CRMP1Q14194 572 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 FAHD2BQ6P2I3 314 aaPredicted RBP12.9□□□□□ -0.34
VARS-223ENST00000474643 USP51Q70EK9 711 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 PEG10Q86TG7 708 aaKnown RBP12.9□□□□□ -0.34
VARS-223ENST00000474643 ZBTB46Q86UZ6 589 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 C1orf174Q8IYL3 243 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 GJC3Q8NFK1 279 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 OR51L1Q8NGJ5 315 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 RAB1CQ92928 201 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 ELMOD3Q96FG2 381 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 FAHD2AQ96GK7 314 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 VCX3BQ9H321 246 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 METTL17Q9H7H0 456 aaPredicted RBP12.9□□□□□ -0.34
VARS-223ENST00000474643 CMC2Q9NRP2 79 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 CYSLTR2Q9NS75 346 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 KRT84Q9NSB2 600 aa12.9□□□□□ -0.34
VARS-223ENST00000474643 IGLV3-9A0A075B6K5 115 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 TVP23AA6NH52 213 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 TIMM8AO60220 97 aaPredicted RBP12.89□□□□□ -0.35
VARS-223ENST00000474643 ATP6V1G2O95670 118 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 HMGN1P05114 100 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 GYPBP06028 91 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 GAAP10253 952 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 ALDH3A2P51648 485 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 SLC3A1Q07837 685 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 KCNMB1Q16558 191 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 OGFRL1Q5TC84 451 aaPredicted RBP12.89□□□□□ -0.35
VARS-223ENST00000474643 CORO6Q6QEF8 472 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 ZBTB49Q6ZSB9 765 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 LINC00346Q8IVM7 164 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 SLC26A10Q8NG04 563 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 OR6K6Q8NGW6 343 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 SLC25A40Q8TBP6 338 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 CCL17Q92583 94 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 POM121L2Q96KW2 1035 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 CIB1Q99828 191 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 GAL3ST1Q99999 423 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 VCXQ9H320 206 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 NKIRAS2Q9NYR9 191 aa12.89□□□□□ -0.35
VARS-223ENST00000474643 LOC100509620A0A075B734 347 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 TRAV20A0A0B4J274 112 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 FAM183AA6NL82 134 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 PRR23D1E9PI22 279 aaPredicted RBP12.88□□□□□ -0.35
VARS-223ENST00000474643 RER1O15258 196 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 ABHD16AO95870 558 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 IGHV3-13P01766 116 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 PRR23D2P0DMB1 279 aaPredicted RBP12.88□□□□□ -0.35
VARS-223ENST00000474643 COX5BP10606 129 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 TNFSF4P23510 183 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 FMO3P31513 532 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 CRYBB2P43320 205 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 DAPP51397 102 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 RAD23AP54725 363 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 PPP1CBP62140 327 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 FAM209AQ5JX71 171 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 ACSM5Q6NUN0 579 aa12.88□□□□□ -0.35
VARS-223ENST00000474643 VASH1Q7L8A9 365 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms