RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 TRIM15Q9C019 465 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 OCEL1Q9H607 264 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 WDR76Q9H967 626 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 GCM1Q9NP62 436 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 NDE1Q9NXR1 346 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 IL20Q9NYY1 176 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 UBAP1Q9NZ09 502 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 CDH10Q9Y6N8 788 aa15.63■□□□□ 0.09
COL7A1-209ENST00000474432 A0A0A6YYJ9 748 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 A0A0G2JMP0 313 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 A0A0X1KG70 313 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 B2RBV5 119 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 J3QLI3 93 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 KRT36O76013 467 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 GASTP01350 101 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 T-ENOLP0DO92 83 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 ADRA2CP18825 462 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 TNFRSF1AP19438 455 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 TNFSF4P23510 183 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 PRSS12P56730 875 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 SEC61A1P61619 476 aaKnown RBP15.62■□□□□ 0.09
COL7A1-209ENST00000474432 PPP1R8Q12972 351 aaKnown RBP15.62■□□□□ 0.09
COL7A1-209ENST00000474432 TMEM155Q4W5P6 130 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 CLEC12AQ5QGZ9 265 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 DCAF12L2Q5VW00 463 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 SHQ1Q6PI26 577 aaKnown RBP15.62■□□□□ 0.09
COL7A1-209ENST00000474432 OR4M2Q8NGB6 313 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 CCT8L2Q96SF2 557 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 SLC30A2Q9BRI3 323 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 PATZ1Q9HBE1 687 aaKnown RBP15.62■□□□□ 0.09
COL7A1-209ENST00000474432 MMP26Q9NRE1 261 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 PPP1R3CQ9UQK1 317 aa15.62■□□□□ 0.09
COL7A1-209ENST00000474432 IQCF6A8MYZ5 107 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 F5H0A9 414 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-209ENST00000474432 TRAPPC2LH3BP13 241 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 TMEM178BH3BS89 294 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 TNFRSF11BO00300 401 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 EPHA1P21709 976 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 NOS3P29474 1203 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 PYCR1P32322 319 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 SLC6A9P48067 706 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 MMP16P51512 607 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 MXRA7P84157 204 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 TUSC1Q2TAM9 212 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 LCN8Q6JVE9 175 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 LYPD4Q6UWN0 246 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 PEG10Q86TG7 708 aaKnown RBP15.61■□□□□ 0.09
COL7A1-209ENST00000474432 CYB561A3Q8NBI2 242 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 OR10AD1Q8NGE0 317 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 OR5L1Q8NGL2 311 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 MEGF10Q96KG7 1140 aa15.61■□□□□ 0.09
COL7A1-209ENST00000474432 POLR3KQ9Y2Y1 108 aaPredicted RBP15.61■□□□□ 0.09
COL7A1-209ENST00000474432 PPIAL4EA0A075B759 164 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 PPIAL4CA0A0B4J2A2 164 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 C5orf63A6NC05 138 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 PPIAL4DF5H284 164 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 RGS9O75916 674 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-209ENST00000474432 PPIAL4FP0DN26 164 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 PMELP40967 661 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 RPS27P42677 84 aaKnown RBP15.6■□□□□ 0.09
COL7A1-209ENST00000474432 BTG1P62324 171 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 TRAP1Q12931 704 aaKnown RBP15.6■□□□□ 0.09
COL7A1-209ENST00000474432 GK2Q14410 553 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-209ENST00000474432 SLC36A3Q495N2 470 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 RASSF6Q6ZTQ3 369 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 ATG16L2Q8NAA4 619 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 DEFB108BQ8NET1 73 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 OR13G1Q8NGZ3 307 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 OR4Q3Q8NH05 313 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 ZNF420Q8TAQ5 688 aaPredicted RBP15.6■□□□□ 0.09
COL7A1-209ENST00000474432 NSL1Q96IY1 281 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 PITX2Q99697 317 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 ATF6BQ99941 703 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 C7orf69Q9H7B7 122 aa15.6■□□□□ 0.09
COL7A1-209ENST00000474432 F5H5K5 113 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 F5H5P2 479 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 SURF4O15260 269 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 FOXH1O75593 365 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 GATA3P23771 443 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 MNAT1P51948 309 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 HILS1P60008 231 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 ECH1Q13011 328 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 TRIM25Q14258 630 aaKnown RBP15.59■□□□□ 0.09
COL7A1-209ENST00000474432 LNX2Q8N448 690 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 SLC37A3Q8NCC5 494 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 BHLHE23Q8NDY6 225 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 DVL3Q92997 716 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-209ENST00000474432 ZNF582Q96NG8 517 aaPredicted RBP15.59■□□□□ 0.09
COL7A1-209ENST00000474432 RBM4Q9BWF3 364 aaKnown RBP15.59■□□□□ 0.09
COL7A1-209ENST00000474432 NMNAT2Q9BZQ4 307 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 MAGIXQ9H6Y5 334 aa15.59■□□□□ 0.09
COL7A1-209ENST00000474432 NBEAL1Q6ZS30 2694 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 IGHV3-64DA0A0J9YX35 117 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 TVP23AA6NH52 213 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 A8MXK9 166 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 CCNB2O95067 398 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 HLA-DPB1P04440 258 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 WNT2P09544 360 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 SELEP16581 610 aa15.58■□□□□ 0.08
COL7A1-209ENST00000474432 OTX1P32242 354 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms