RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 HOGA1Q86XE5 327 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 GKN2Q86XP6 184 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 ANGPTL5Q86XS5 388 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 CSNK1A1LQ8N752 337 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 TOX2Q96NM4 488 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 RGCCQ9H4X1 137 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 B9D1Q9UPM9 204 aa16.67■□□□□ 0.26
ECHDC1-214ENST00000474289 METTL21EPA6NDL7 271 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 PRR19A6NJB7 356 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 FOXS1O43638 330 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 RENP00797 406 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 HOXC4P09017 264 aaPredicted RBP16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 ASAH2BP0C7U1 165 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 VIPR2P41587 438 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 EIF5AP63241 154 aaKnown RBP16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 TCEA2Q15560 299 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 SLC9A3R2Q15599 337 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 OR4C3Q8NH37 302 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 PTX4Q96A99 478 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 MESP1Q9BRJ9 268 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 LMF2Q9BU23 707 aaKnown RBP16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 HDAC8Q9BY41 377 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 NRSN2Q9GZP1 204 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB18Q9NP72 206 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 LRIT1Q9P2V4 623 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 URADA6NGE7 173 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 YIF1AO95070 293 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 PLGP00747 810 aaPredicted RBP16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 HLA-DQA2P01906 255 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 ZNF10P21506 573 aaPredicted RBP16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 SQSTM1Q13501 440 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 ZNHIT3Q15649 155 aaPredicted RBP16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 KDF1Q8NAX2 398 aaPredicted RBP16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 LIPHQ8WWY8 451 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 TMEM230Q96A57 120 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 OR10C1Q96KK4 312 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 KIR3DX1Q9H7L2 352 aa16.66■□□□□ 0.26
ECHDC1-214ENST00000474289 UNC80Q8N2C7 3258 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 OIP5O43482 229 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 CEACAM5P06731 702 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 SULT1A1P50225 295 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 EMC4Q5J8M3 183 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 TMEM268Q5VZI3 342 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 CLEC18BQ6UXF7 455 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 LYPD6BQ8NI32 183 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB7BQ96AH8 199 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 ELF4Q99607 663 aaPredicted RBP16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 C5orf66Q9H5L9 145 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 A0A1W2PPE2 198 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 SERINC4A6NH21 518 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 IFITM10A6NMD0 228 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 GNB3P16520 340 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB6AP20340 208 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 EGR4Q05215 589 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 C1orf100Q5SVJ3 147 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 FIP1L1Q6UN15 594 aaKnown RBP16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 NPSR1Q6W5P4 371 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 MDGA2Q7Z553 956 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 RTN4RL2Q86UN3 420 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 GTF3AQ92664 365 aaKnown RBP16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 FAM46BQ96A09 425 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 ANKRD9Q96BM1 317 aaPredicted RBP16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 DEFB118Q96PH6 123 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 RAB33BQ9H082 229 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 PARP12Q9H0J9 701 aaKnown RBP16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 OPA3Q9H6K4 179 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 SPACA1Q9HBV2 294 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 GDE1Q9NZC3 331 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 DNAJB11Q9UBS4 358 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 STARD10Q9Y365 291 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 RHBDD3Q9Y3P4 386 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 SPACA6W5XKT8 324 aa16.65■□□□□ 0.26
ECHDC1-214ENST00000474289 MUC22E2RYF6 1773 aaPredicted RBP16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 LOC390937A0A1W2PQ73 354 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 HRKO00198 91 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 S1PR1P21453 382 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 DNASE1L1P49184 302 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 P2RY4P51582 365 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 SKP2Q13309 424 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 CHRDQ9H2X0 955 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 SLC2A4RGQ9NR83 387 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 PHPT1Q9NRX4 125 aaPredicted RBP16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 MEGF11A6BM72 1044 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 K7EQS6 105 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 TAAR5O14804 337 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 OR10H2O60403 315 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 ADH1CP00326 375 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 ITGA3P26006 1051 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 DRD3P35462 400 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 UNC119Q13432 240 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 ATG4DQ86TL0 474 aaPredicted RBP16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 CATSPERDQ86XM0 798 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 LYPD6Q86Y78 171 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 ZNF383Q8NA42 475 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 GATSQ8NAP1 163 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 OR13C3Q8NGS6 347 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 SPACA7Q96KW9 195 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 RHOVQ96L33 236 aa16.64■□□□□ 0.25
ECHDC1-214ENST00000474289 UFSP2Q9NUQ7 469 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms