RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 OR6Q1Q8NGQ2 317 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 FAM81AQ8TBF8 368 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 ACMSDQ8TDX5 336 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 APH1BQ8WW43 257 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 TGS1Q96RS0 853 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 CHCHD7Q9BUK0 85 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 ANKRD60Q9BZ19 345 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 TOLLIPQ9H0E2 274 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 MYOZ1Q9NP98 299 aaPredicted RBP1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 HPCAL4Q9UM19 191 aa1.68□□□□□ -2.14
ECHDC1-213ENST00000474240 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 IGKV3D-11A0A0A0MRZ8 115 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 A0A1B0GUH1 482 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 ZNF716A6NP11 495 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 AP3B1O00203 1094 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 MANBAO00462 879 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 POLR1CO15160 346 aaPredicted RBP1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 CLDN11O75508 207 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 HLA-DQB1P01920 261 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 FTH1P02794 183 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 EIF4EP06730 217 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 ZNF806P0C7X5 589 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 IL32P24001 234 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 MYL9P24844 172 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 RND2P52198 227 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 TAS2R31P59538 309 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 KDSRQ06136 332 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 TRAM2Q15035 370 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 MAJINQ3KP22 176 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 TPTE2P1Q5T6R2 138 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 ARMC12Q5T9G4 340 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 MBOAT2Q6ZWT7 520 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 MDP1Q86V88 176 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 SLC22A9Q8IVM8 553 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 TTLQ8NG68 377 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 OR52E2Q8NGJ4 325 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 DUS3LQ96G46 650 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 BTN2A3PQ96KV6 586 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 FAM192AQ9GZU8 254 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 MRM3Q9HC36 420 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 PDP1Q9P0J1 537 aaPredicted RBP1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 PITPNC1Q9UKF7 332 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 SAR1BQ9Y6B6 198 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 TUBGCP6Q96RT7 1819 aa1.67□□□□□ -2.14
ECHDC1-213ENST00000474240 COL22A1Q8NFW1 1626 aaPredicted RBP1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 IGHV3OR16-9A0A0B4J2B5 98 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 IGKV2-24A0A0C4DH68 120 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 GOLGA8OA6NCC3 632 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 GOLGA8NF8WBI6 632 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 L7N2F9 121 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 RNF13O43567 381 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 SCO1O75880 301 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 LSM8O95777 96 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 AGTP01019 485 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 CD37P11049 281 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 HTR1DP28221 377 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 GTF2E2P29084 291 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 HMOX2P30519 316 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 PRMT2P55345 433 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 C21orf59P57076 290 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 SLC39A6Q13433 755 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 RNASE13Q5GAN3 156 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 TEX30Q5JUR7 227 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 CARD17Q5XLA6 110 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 SPESP1Q6UW49 350 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 CASP12Q6UXS9 341 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 NKAIN4Q8IVV8 208 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 CMTM1Q8IZ96 169 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 MIR7-3HGQ8N6C7 128 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 TMEM104Q8NE00 496 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 OR5K2Q8NHB8 316 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 CIRBP-AS1Q8TBR5 109 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 MCUR1Q96AQ8 359 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 NEURL3Q96EH8 262 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 C20orf24Q9BUV8 137 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 TEKT3Q9BXF9 490 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 TMEM27Q9HBJ8 222 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 CABIN1Q9Y6J0 2220 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 BRWD3Q6RI45 1802 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 TNS2Q63HR2 1409 aa1.66□□□□□ -2.14
ECHDC1-213ENST00000474240 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 IGHV3OR16-8A0A075B7F1 116 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 IGHV1-69DA0A0B4J2H0 117 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 PLIN3O60664 434 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 HUS1O60921 280 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 GATBO75879 557 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 GLSO94925 669 aaPredicted RBP1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 CYB5R3P00387 301 aaPredicted RBP1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 HPRT1P00492 218 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 PCK1P35558 622 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 TAGLN2P37802 199 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 PRLHRP49683 370 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 GFERP55789 205 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 RPS23P62266 143 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 RPL23P62829 140 aaKnown RBP1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 FUT5Q11128 374 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 IDI1Q13907 227 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 RCN1Q15293 331 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 SOHLH1Q5JUK2 328 aa1.65□□□□□ -2.15
ECHDC1-213ENST00000474240 C1orf185Q5T7R7 199 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms