RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 A0A1B0GTI1 187 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 ITGA5P08648 1049 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 PITPNBP48739 271 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 BCAP31P51572 246 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 SCN1BQ07699 218 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 GFOD2Q3B7J2 385 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 TMEM244Q5VVB8 128 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 IGFL2Q6UWQ7 119 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 CCBE1Q6UXH8 406 aaPredicted RBP15.82■□□□□ 0.12
VARS2-206ENST00000473916 FAM57BQ71RH2 274 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 ZNF283Q8N7M2 679 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 CELF2-AS1Q8N7Q2 184 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 FGGYQ96C11 551 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 ADAT3Q96EY9 351 aaPredicted RBP15.82■□□□□ 0.12
VARS2-206ENST00000473916 KCNJ15Q99712 375 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 WACQ9BTA9 647 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 C11orf54Q9H0W9 315 aaPredicted RBP15.82■□□□□ 0.12
VARS2-206ENST00000473916 ZDHHC11Q9H8X9 412 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 GPR35Q9HC97 309 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 CDV3Q9UKY7 258 aaKnown RBP15.82■□□□□ 0.12
VARS2-206ENST00000473916 TRGV5A0A0B4J1U4 118 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 ACOT7O00154 380 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 SYNGR4O95473 234 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 TMIGD3P0DMS9 266 aaPredicted RBP15.82■□□□□ 0.12
VARS2-206ENST00000473916 SPOCK1Q08629 439 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 UBE2NLQ5JXB2 153 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 FAM27BQ5VT28 67 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 MTFR2Q6P444 385 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 PRSS45Q7RTY3 260 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 GJC3Q8NFK1 279 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 OR1J2Q8NGS2 313 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 FGFBP3Q8TAT2 258 aa15.82■□□□□ 0.12
VARS2-206ENST00000473916 CGGBP1Q9UFW8 167 aaPredicted RBP15.82■□□□□ 0.12
VARS2-206ENST00000473916 MRPS7Q9Y2R9 242 aaKnown RBP15.82■□□□□ 0.12
VARS2-206ENST00000473916 F5H5K5 113 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 SYT7O43581 403 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 CD2P06729 351 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 PTBP1P26599 531 aaKnown RBP eCLIP15.81■□□□□ 0.12
VARS2-206ENST00000473916 FOXG1P55316 489 aaPredicted RBP15.81■□□□□ 0.12
VARS2-206ENST00000473916 HIST1H3AP68431 136 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 HIST2H3PS2Q5TEC6 136 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 C9orf135Q5VTT2 229 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 TRIQKQ629K1 86 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 HIST2H3AQ71DI3 136 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 RHOUQ7L0Q8 258 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 LUZP2Q86TE4 346 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 CPT1CQ8TCG5 803 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 GCDHQ92947 438 aaPredicted RBP15.81■□□□□ 0.12
VARS2-206ENST00000473916 TMEM45BQ96B21 275 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 WDYHV1Q96HA8 205 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 SLC7A10Q9NS82 523 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 TBCCD1Q9NVR7 557 aa15.81■□□□□ 0.12
VARS2-206ENST00000473916 MCTS1Q9ULC4 181 aaKnown RBP15.81■□□□□ 0.12
VARS2-206ENST00000473916 KLK10O43240 276 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 MRPL33O75394 65 aaKnown RBP15.8■□□□□ 0.12
VARS2-206ENST00000473916 HLA-DQB1P01920 261 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 FSTP19883 344 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 GRB2P62993 217 aaKnown RBP15.8■□□□□ 0.12
VARS2-206ENST00000473916 ASAH1Q13510 395 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 ABHD12BQ7Z5M8 362 aaPredicted RBP15.8■□□□□ 0.12
VARS2-206ENST00000473916 COMMD2Q86X83 199 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 CADM3Q8N126 398 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 SETD6Q8TBK2 473 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 ZFP3Q96NJ6 502 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 FOXB1Q99853 325 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 PRRG4Q9BZD6 226 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 ZNF275Q9NSD4 429 aaPredicted RBP15.8■□□□□ 0.12
VARS2-206ENST00000473916 PLEK2Q9NYT0 353 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 APC2O95996 2303 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 CDK2AP1O14519 115 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 TFECO14948 347 aaPredicted RBP15.8■□□□□ 0.12
VARS2-206ENST00000473916 EEF1E1O43324 174 aaKnown RBP15.8■□□□□ 0.12
VARS2-206ENST00000473916 TGM6O95932 706 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 ACTL6AO96019 429 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 EFNB2P52799 333 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 DGCR2P98153 550 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 BCL2A1Q16548 175 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 ELFN2Q5R3F8 820 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 ZNF774Q6NX45 483 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 GLCCI1Q86VQ1 547 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 OR51D1Q8NGF3 324 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 SYNPRQ8TBG9 265 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 TRIM63Q969Q1 353 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 SLCO5A1Q9H2Y9 848 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 GPR84Q9NQS5 396 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 STEAP1Q9UHE8 339 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 FOXJ3Q9UPW0 622 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 CAMK2AQ9UQM7 478 aa15.8■□□□□ 0.12
VARS2-206ENST00000473916 ATMQ13315 3056 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 SLC6A9P48067 706 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 HGFACQ04756 655 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 FOXC1Q12948 553 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 CARTPTQ16568 116 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 SFRP5Q5T4F7 317 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 BIVMQ86UB2 503 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 AKR7LQ8NHP1 331 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 THRSPQ92748 146 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 FAM71F1Q96KD3 344 aaPredicted RBP15.79■□□□□ 0.12
VARS2-206ENST00000473916 LYZL4Q96KX0 146 aa15.79■□□□□ 0.12
VARS2-206ENST00000473916 NIPAL2Q9H841 368 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms