RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 CPOQ8IVL8 374 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 ST7LQ8TDW4 575 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 APOBEC3DQ96AK3 386 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 C1QTNF5Q9BXJ0 243 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 MARCH7Q9H992 704 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 MSL2Q9HCI7 577 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 KRT84Q9NSB2 600 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 DDX28Q9NUL7 540 aaKnown RBP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 NKIRAS2Q9NYR9 191 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 TMEFF2Q9UIK5 374 aaPredicted RBP16.12■□□□□ 0.17
PTCD3-210ENST00000473829 OAZ3Q9UMX2 235 aa16.12■□□□□ 0.17
PTCD3-210ENST00000473829 TANC2Q9HCD6 1990 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 M0R129 80 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 SPRY3O43610 288 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 TIMM8AO60220 97 aaPredicted RBP16.11■□□□□ 0.17
PTCD3-210ENST00000473829 RP2O75695 350 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 KITLGP21583 273 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 PAICSP22234 425 aaKnown RBP16.11■□□□□ 0.17
PTCD3-210ENST00000473829 SLC2A5P22732 501 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 TUBG1P23258 451 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 GSTT1P30711 240 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 PRSS12P56730 875 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 ECH1Q13011 328 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 PTGES3Q15185 160 aaKnown RBP16.11■□□□□ 0.17
PTCD3-210ENST00000473829 TRIP10Q15642 601 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 PCGF3Q3KNV8 242 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 SPRNQ5BIV9 151 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 Q6ZR03 302 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 ERI1Q8IV48 349 aaKnown RBP16.11■□□□□ 0.17
PTCD3-210ENST00000473829 TIGD4Q8IY51 512 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 OR6N2Q8NGY6 317 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 RDH5Q92781 318 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 HAVCR1Q96D42 359 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 ZMYND19Q96E35 227 aaPredicted RBP16.11■□□□□ 0.17
PTCD3-210ENST00000473829 CENPNQ96H22 339 aaPredicted RBP16.11■□□□□ 0.17
PTCD3-210ENST00000473829 PKP2Q99959 881 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 TUBG2Q9NRH3 451 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 TVP23BQ9NYZ1 205 aa16.11■□□□□ 0.17
PTCD3-210ENST00000473829 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.11■□□□□ 0.17
PTCD3-210ENST00000473829 PLSCR5A0PG75 271 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 C5orf63A6NC05 138 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 SAC3D1A6NKF1 404 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 CDC14BO60729 498 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 MT-ND5P03915 603 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 HOXB4P17483 251 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-210ENST00000473829 OTX1P32242 354 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-210ENST00000473829 BLVRAP53004 296 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 RIPPLY3P57055 190 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 ESRRGP62508 458 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 HNRNPA0Q13151 305 aaKnown RBP16.1■□□□□ 0.17
PTCD3-210ENST00000473829 FBXW12Q6X9E4 464 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 SPATC1Q76KD6 591 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 DPY19L4Q7Z388 723 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 SLAMF6Q96DU3 332 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 COG8Q96MW5 612 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 INTS14Q96SY0 518 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 AMELYQ99218 206 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 CIB1Q99828 191 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 CHODLQ9H9P2 273 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 ZNF275Q9NSD4 429 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-210ENST00000473829 CGGBP1Q9UFW8 167 aaPredicted RBP16.1■□□□□ 0.17
PTCD3-210ENST00000473829 CACNG2Q9Y698 323 aa16.1■□□□□ 0.17
PTCD3-210ENST00000473829 HIVEP2P31629 2446 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 LRP5LA4QPB2 252 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 INAFM1C9JVW0 142 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 M0R135 149 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 CD5LO43866 347 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 PRKYO43930 277 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 SELENOFO60613 162 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 LILRA1O75019 489 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 ADH4P08319 380 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 IGHV4-31P0DP07 118 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 RAC2P15153 192 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 ACHEP22303 614 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 MRPS11P82912 194 aaKnown RBP16.09■□□□□ 0.17
PTCD3-210ENST00000473829 PPP2R2BQ00005 443 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 EIF2B1Q14232 305 aaKnown RBP16.09■□□□□ 0.17
PTCD3-210ENST00000473829 SNAPC1Q16533 368 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 KLHL12Q53G59 568 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 USP51Q70EK9 711 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 CXXC5Q7LFL8 322 aaKnown RBP16.09■□□□□ 0.17
PTCD3-210ENST00000473829 OR5AS1Q8N127 324 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 ZNF799Q96GE5 643 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 PLEKHA8Q96JA3 519 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 COPS4Q9BT78 406 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 SOX7Q9BT81 388 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 CYSLTR2Q9NS75 346 aa16.09■□□□□ 0.17
PTCD3-210ENST00000473829 ZAR1LA6NP61 321 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 ZNF878C9JN71 531 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 PRODHO43272 600 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 LCATP04180 440 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 TACSTD2P09758 323 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 IGFBP5P24593 272 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 IL2RGP31785 369 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 TPTEP56180 551 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 CDK5R2Q13319 367 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 SNAI3Q3KNW1 292 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 FAM209AQ5JX71 171 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 SLX4IPQ5VYV7 408 aa16.08■□□□□ 0.16
PTCD3-210ENST00000473829 OR2T2Q6IF00 324 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms