RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 PDCD10Q9BUL8 212 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 ACKR4Q9NPB9 350 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 DLL4Q9NR61 685 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 RALYQ9UKM9 306 aaKnown RBP13.16□□□□□ -0.3
LMNA-213ENST00000473598 SF3B6Q9Y3B4 125 aaKnown RBP13.16□□□□□ -0.3
LMNA-213ENST00000473598 NPTNQ9Y639 398 aa13.16□□□□□ -0.3
LMNA-213ENST00000473598 OR6C68A6NDL8 312 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 AQP7P3A6NL99 342 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ZNF814B7Z6K7 855 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 EIF1AYO14602 144 aaKnown RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 LPLP06858 475 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 SULT1A3P0DMM9 295 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 SULT1A4P0DMN0 295 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 CLUP10909 449 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 POU3F2P20265 443 aaPredicted RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 SUCLG1P53597 346 aaKnown RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 LY6DQ14210 128 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 SLC10A1Q14973 349 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 PYHIN1Q6K0P9 492 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 CNIH2Q6PI25 160 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 KRT77Q7Z794 578 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 EXD3Q8N9H8 876 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ZNF519Q8TB69 540 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ZPLD1Q8TCW7 415 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 MFRPQ9BY79 579 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 NMNAT2Q9BZQ4 307 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 NKX6-2Q9C056 277 aaPredicted RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 OR51V1Q9H2C8 321 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 TXNL4BQ9NX01 149 aaKnown RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 B3GAT1Q9P2W7 334 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 TLN1Q9Y490 2541 aaKnown RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 SLC22A31A6NKX4 558 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 LGALS8O00214 317 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 APOC3P02656 99 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ATP6V1E1P36543 226 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ACVR1BP36896 505 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 HSF1Q00613 529 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 ACSM1Q08AH1 577 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 FAM76BQ5HYJ3 339 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 RNFT1Q5M7Z0 435 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 TMEM225Q6GV28 225 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ELP2Q6IA86 826 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 NLRC3Q7RTR2 1065 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 SCARB1Q8WTV0 552 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 KISS1RQ969F8 398 aaPredicted RBP13.15□□□□□ -0.3
LMNA-213ENST00000473598 TMEM203Q969S6 136 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 LRRC46Q96FV0 321 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ABHD17AQ96GS6 310 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ADGRG7Q96K78 797 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 TEAD3Q99594 435 aa13.15□□□□□ -0.3
LMNA-213ENST00000473598 ZNF407Q9C0G0 2248 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 LOC102725191A0A1B0GVB3 256 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 MKRN2OSH3BPM6 223 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 XKRYO14609 159 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 DNPH1O43598 174 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 EIF3GO75821 320 aaKnown RBP eCLIP13.14□□□□□ -0.31
LMNA-213ENST00000473598 GYPBP06028 91 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 ACAA1P09110 424 aaPredicted RBP13.14□□□□□ -0.31
LMNA-213ENST00000473598 DAP3P51398 398 aaKnown RBP13.14□□□□□ -0.31
LMNA-213ENST00000473598 CLDN15P56746 228 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 RAC3P60763 192 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 MELKQ14680 651 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 SGCAQ16586 387 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 ZNF57Q68EA5 555 aaPredicted RBP13.14□□□□□ -0.31
LMNA-213ENST00000473598 HBMQ6B0K9 141 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 NHLRC1Q6VVB1 395 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 B3GLCTQ6Y288 498 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 ASB18Q6ZVZ8 466 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 SLC35D2Q76EJ3 337 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 FGD2Q7Z6J4 655 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 KLHL36Q8N4N3 616 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 OR51G2Q8NGK0 314 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 MRPS24Q96EL2 167 aaKnown RBP13.14□□□□□ -0.31
LMNA-213ENST00000473598 OXGR1Q96P68 337 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 NAA11Q9BSU3 229 aaPredicted RBP13.14□□□□□ -0.31
LMNA-213ENST00000473598 ZDHHC11Q9H8X9 412 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 NUBP2Q9Y5Y2 271 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 DNAJC13O75165 2243 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 ALPK2Q86TB3 2170 aa13.14□□□□□ -0.31
LMNA-213ENST00000473598 A0A1B0GW55 424 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 NPIPA5E9PKD4 350 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 RAMP1O60894 148 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 RENP00797 406 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 DUX4L2P0CJ85 424 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 DUX4L3P0CJ86 424 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 DUX4L4P0CJ87 422 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 DUX4L5P0CJ88 424 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 DUX4L6P0CJ89 424 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 DUX4L7P0CJ90 424 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 SFTPCP11686 197 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 IFNGR1P15260 489 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 KLK2P20151 261 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 GABRA5P31644 462 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 LHX2P50458 406 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 SLC25A1P53007 311 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 SLC16A1P53985 500 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 CARD18P57730 90 aa13.13□□□□□ -0.31
LMNA-213ENST00000473598 RPS7P62081 194 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms