RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 OR51D1Q8NGF3 324 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 AKR7LQ8NHP1 331 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 HAS2Q92819 552 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 CPNE4Q96A23 557 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 ADAT3Q96EY9 351 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 SPACA5Q96QH8 159 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 PRRX2Q99811 253 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SF3B5Q9BWJ5 86 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 PRRG4Q9BZD6 226 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 HDHD2Q9H0R4 259 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 AUNIPQ9H7T9 357 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 MRPL15Q9P015 296 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 LUZP4Q9P127 313 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ADAM30Q9UKF2 790 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SPATA2Q9UM82 520 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 A0A096LPE4 126 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 A0A1W2PPZ6 126 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 HSPB2A8KAH6 182 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 PDCD5O14737 125 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 KLK10O43240 276 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SYT7O43581 403 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 DNPH1O43598 174 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 TGM6O95932 706 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 FCER2P06734 321 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ABOP16442 354 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 GNALP38405 381 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 PITPNBP48739 271 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 MMP16P51512 607 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 DEFA1P59665 94 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 DEFA3P59666 94 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 PSMA6P60900 246 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 SCN1BQ07699 218 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 FOXC1Q12948 553 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 HSPB2Q16082 182 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 RSPO1Q2MKA7 263 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 CCDC92Q53HC0 331 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 ZNF57Q68EA5 555 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 OR10K2Q6IF99 312 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ZNF774Q6NX45 483 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ABHD12BQ7Z5M8 362 aaPredicted RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 BIVMQ86UB2 503 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 OR1J2Q8NGS2 313 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SYNPRQ8TBG9 265 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 PHYHIPQ92561 330 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 GPR84Q9NQS5 396 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 SLC7A10Q9NS82 523 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 PLEK2Q9NYT0 353 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 ABRACLQ9P1F3 81 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 CAMK2AQ9UQM7 478 aa5.48□□□□□ -1.53
CLK1-210ENST00000473565 NOSIPQ9Y314 301 aaKnown RBP5.48□□□□□ -1.53
CLK1-210ENST00000473565 TLN1Q9Y490 2541 aaKnown RBP5.47□□□□□ -1.53
CLK1-210ENST00000473565 A0A1B0GTI1 187 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 PTTG1O95997 202 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 ACHEP22303 614 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 ZNF84P51523 738 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 HGFACQ04756 655 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 KCNMB1Q16558 191 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 ZNF544Q6NX49 715 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 DEGS2Q6QHC5 323 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 ELMOD2Q8IZ81 293 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 FAM109AQ8N4B1 249 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 MEIOBQ8N635 442 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 OR13C9Q8NGT0 318 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 HAVCR2Q8TDQ0 301 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 SCMH1Q96GD3 660 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 FAM117AQ9C073 453 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 C12orf49Q9H741 205 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 TMEM38BQ9NVV0 291 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 ARHGAP21Q5T5U3 1957 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 TRGV5A0A0B4J1U4 118 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 K7EM74 188 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 KRT33AO76009 404 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 KDM4BO94953 1096 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 SYNGR4O95473 234 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 APOA1P02647 267 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 CD2P06729 351 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 ZNF32P17041 273 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 ZNF704Q6ZNC4 412 aaPredicted RBP5.47□□□□□ -1.53
CLK1-210ENST00000473565 UTS2BQ765I0 119 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 NUFIP2Q7Z417 695 aaKnown RBP5.47□□□□□ -1.53
CLK1-210ENST00000473565 JAGN1Q8N5M9 183 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 C19orf18Q8NEA5 215 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 PNPLA2Q96AD5 504 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 CYYR1Q96J86 154 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 SP140LQ9H930 580 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 GPR35Q9HC97 309 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 KCNMB2Q9Y691 235 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 NCOR2Q9Y618 2525 aa5.47□□□□□ -1.53
CLK1-210ENST00000473565 A0A1B0GVI7 797 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 MRPL33O75394 65 aaKnown RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 RAF1P04049 648 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 ISG15P05161 165 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 UBCP0CG48 685 aaKnown RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 KIR2DL3P43628 341 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 POU3F4P49335 361 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 ZNF133P52736 654 aaPredicted RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 LSM6P62312 80 aaKnown RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 MRPS34P82930 218 aaKnown RBP5.46□□□□□ -1.53
CLK1-210ENST00000473565 SNAI3Q3KNW1 292 aa5.46□□□□□ -1.53
CLK1-210ENST00000473565 UBE2NLQ5JXB2 153 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms