RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 FXYD1O00168 92 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 ENSAO43768 121 aaKnown RBP10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4L2P0CJ85 424 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4L3P0CJ86 424 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4L4P0CJ87 422 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4L5P0CJ88 424 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4L6P0CJ89 424 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4L7P0CJ90 424 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 TUBG1P23258 451 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 SLC9A3P48764 834 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 SRP9P49458 86 aaKnown RBP10.41□□□□□ -0.74
TRAF4-209ENST00000473421 RAD23AP54725 363 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 ARF6P62330 175 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 SCRN3Q0VDG4 424 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 COX10Q12887 443 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 PDCD1Q15116 288 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 NANOGP8Q6NSW7 305 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 CORO6Q6QEF8 472 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4L9Q6RFH8 374 aaPredicted RBP10.41□□□□□ -0.74
TRAF4-209ENST00000473421 NLRC3Q7RTR2 1065 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 FAM122BQ7Z309 247 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.41□□□□□ -0.74
TRAF4-209ENST00000473421 BOLLQ8N9W6 283 aaKnown RBP10.41□□□□□ -0.74
TRAF4-209ENST00000473421 PCYOX1LQ8NBM8 494 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 RERGLQ9H628 205 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 TUBG2Q9NRH3 451 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 DUX4Q9UBX2 424 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 RAB21Q9UL25 225 aa10.41□□□□□ -0.74
TRAF4-209ENST00000473421 TEX13CA0A0J9YWL9 993 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 ZNF816-ZNF321PA0A0X1KG74 233 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 PRSS37A4D1T9 235 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 GMNCA6NCL1 334 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 A6NIZ1 184 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 IFNL4K9M1U5 179 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 P2RY10O00398 339 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 DCTN6O00399 190 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 FSTL3O95633 263 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 CPT2P23786 658 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 FPR3P25089 353 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 GUCA1AP43080 201 aaPredicted RBP10.4□□□□□ -0.74
TRAF4-209ENST00000473421 GATA4P43694 442 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 GPR4P46093 362 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 BPIFB3P59826 476 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 RAP1BP61224 184 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 RAP1AP62834 184 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 EGR3Q06889 387 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 AQP6Q13520 282 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 TTMPQ5BVD1 217 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 KPRPQ5T749 579 aaPredicted RBP10.4□□□□□ -0.74
TRAF4-209ENST00000473421 SAMD5Q5TGI4 173 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 PTCHD4Q6ZW05 846 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 TBC1D15Q8TC07 691 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 GATAD2BQ8WXI9 593 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 TSSK2Q96PF2 358 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 MMADHCQ9H3L0 296 aaPredicted RBP10.4□□□□□ -0.74
TRAF4-209ENST00000473421 TMBIM4Q9HC24 238 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 TMEM100Q9NV29 134 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 LHFPL6Q9Y693 200 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 NOTCH3Q9UM47 2321 aa10.4□□□□□ -0.74
TRAF4-209ENST00000473421 TET2Q6N021 2002 aaPredicted RBP10.4□□□□□ -0.75
TRAF4-209ENST00000473421 EFCAB9A8MZ26 197 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 ANGPT2O15123 496 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 OR10H3O60404 316 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 SLC16A7O60669 478 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 NR2C1P13056 603 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 HIST1H3AP68431 136 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 PRKCDQ05655 676 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 GK2Q14410 553 aaPredicted RBP10.39□□□□□ -0.75
TRAF4-209ENST00000473421 FAM189A2Q15884 450 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 CYBRD1Q53TN4 286 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 HIST2H3PS2Q5TEC6 136 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 COLCA1Q6ZS62 124 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 ZNF826PQ6ZT77 177 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 HIST2H3AQ71DI3 136 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 OAFQ86UD1 273 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 LDLRAD3Q86YD5 345 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 PNKDQ8N490 385 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 C11orf44Q8N8P7 122 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 FNDC8Q8TC99 324 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 Q8TCH9 128 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 ITPKCQ96DU7 683 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 ZNF583Q96ND8 569 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 ECSITQ9BQ95 431 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 SYT4Q9H2B2 425 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 C16orf95Q9H693 158 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 ADA2Q9NZK5 511 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 DNAJB11Q9UBS4 358 aa10.39□□□□□ -0.75
TRAF4-209ENST00000473421 A0A087WUU8 490 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 A0A1W2PRD5 423 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 A0A1W2PRF3 423 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 A0A1W2PRM7 423 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 LRRC30A6NM36 301 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 ADAM20O43506 726 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 GYPAP02724 150 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 CD14P08571 375 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 CSF1P09603 554 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 FXYD6P3P58550 94 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 KRTAP27-1Q3LI81 207 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 CFAP77Q6ZQR2 320 aa10.38□□□□□ -0.75
TRAF4-209ENST00000473421 BTN2A1Q7KYR7 527 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms