RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 C1QL2Q7Z5L3 287 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 FITM2Q8N6M3 262 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 DEFB108BQ8NET1 73 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 OR51L1Q8NGJ5 315 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 OR4C15Q8NGM1 316 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 GNPDA2Q8TDQ7 276 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 MAP6Q96JE9 813 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 SLC6A7Q99884 636 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 C7orf69Q9H7B7 122 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 ESM1Q9NQ30 184 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 PPP1R3CQ9UQK1 317 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 LYVE1Q9Y5Y7 322 aa14.02□□□□□ -0.17
USP40-212ENST00000473191 TVP23AA6NH52 213 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 F5H5P2 479 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 TMEM178BH3BS89 294 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 BHLHE40O14503 412 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 FSHBP01225 129 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 GASTP01350 101 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 ACSM4P0C7M7 580 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 TUBG1P23258 451 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 NOS3P29474 1203 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 SMIM11AP58511 58 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 BTG1P62324 171 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 ZNF770Q6IQ21 691 aaPredicted RBP14.01□□□□□ -0.17
USP40-212ENST00000473191 DNM1P34Q6PK57 102 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 COLCA1Q6ZS62 124 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 PEG10Q86TG7 708 aaKnown RBP14.01□□□□□ -0.17
USP40-212ENST00000473191 LRRC28Q86X40 367 aaPredicted RBP14.01□□□□□ -0.17
USP40-212ENST00000473191 OR8G5Q8NG78 346 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 APOBEC3DQ96AK3 386 aaPredicted RBP14.01□□□□□ -0.17
USP40-212ENST00000473191 MEGF10Q96KG7 1140 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 PITX2Q99697 317 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 HDHD2Q9H0R4 259 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 PATZ1Q9HBE1 687 aaKnown RBP14.01□□□□□ -0.17
USP40-212ENST00000473191 TUBG2Q9NRH3 451 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 CYB5R1Q9UHQ9 305 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 PCDHB10Q9UN67 800 aa14.01□□□□□ -0.17
USP40-212ENST00000473191 F5H0A9 414 aaPredicted RBP14□□□□□ -0.17
USP40-212ENST00000473191 HLA-DQA2P01906 255 aa14□□□□□ -0.17
USP40-212ENST00000473191 TNFRSF1AP19438 455 aa14□□□□□ -0.17
USP40-212ENST00000473191 TNFSF4P23510 183 aa14□□□□□ -0.17
USP40-212ENST00000473191 SLC6A9P48067 706 aa14□□□□□ -0.17
USP40-212ENST00000473191 HMGA2P52926 109 aa14□□□□□ -0.17
USP40-212ENST00000473191 MXRA7P84157 204 aa14□□□□□ -0.17
USP40-212ENST00000473191 MS4A2Q01362 244 aa14□□□□□ -0.17
USP40-212ENST00000473191 GK2Q14410 553 aaPredicted RBP14□□□□□ -0.17
USP40-212ENST00000473191 C16orf89Q6UX73 402 aa14□□□□□ -0.17
USP40-212ENST00000473191 ST7LQ8TDW4 575 aa14□□□□□ -0.17
USP40-212ENST00000473191 SLC30A2Q9BRI3 323 aa14□□□□□ -0.17
USP40-212ENST00000473191 C1QTNF5Q9BXJ0 243 aa14□□□□□ -0.17
USP40-212ENST00000473191 ATPIF1Q9UII2 106 aa14□□□□□ -0.17
USP40-212ENST00000473191 TMCC3Q9ULS5 477 aa14□□□□□ -0.17
USP40-212ENST00000473191 SOX21Q9Y651 276 aaPredicted RBP14□□□□□ -0.17
USP40-212ENST00000473191 CEACAM18A8MTB9 384 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 IQCF6A8MYZ5 107 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 J3QLI3 93 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 HAX1O00165 279 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 TNFRSF11BO00300 401 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 CLUP10909 449 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 RGS6P49758 472 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 HILS1P60008 231 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 TRAP1Q12931 704 aaKnown RBP13.99□□□□□ -0.17
USP40-212ENST00000473191 MAB21L1Q13394 359 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 SNAI3Q3KNW1 292 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 TMEM155Q4W5P6 130 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 KLF17Q5JT82 389 aaPredicted RBP13.99□□□□□ -0.17
USP40-212ENST00000473191 MOGAT3Q86VF5 341 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 C19orf18Q8NEA5 215 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 OR9Q1Q8NGQ5 310 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 OR4Q3Q8NH05 313 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 COG8Q96MW5 612 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 ZNF582Q96NG8 517 aaPredicted RBP13.99□□□□□ -0.17
USP40-212ENST00000473191 ATF6BQ99941 703 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 CDH10Q9Y6N8 788 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 U3KQV3 271 aa13.99□□□□□ -0.17
USP40-212ENST00000473191 B2RBV5 119 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 FOXH1O75593 365 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 DCTN3O75935 186 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 SOX14O95416 240 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 GYPBP06028 91 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 MAGEA2P43356 314 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 PGM2L1Q6PCE3 622 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 BCL6BQ8N143 479 aaPredicted RBP13.98□□□□□ -0.17
USP40-212ENST00000473191 KLHL36Q8N4N3 616 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 ZDHHC22Q8N966 263 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 AQP11Q8NBQ7 271 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 SLC37A3Q8NCC5 494 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 OR5L1Q8NGL2 311 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 OR13G1Q8NGZ3 307 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 NANPQ8TBE9 248 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 ZNF418Q8TF45 676 aaPredicted RBP13.98□□□□□ -0.17
USP40-212ENST00000473191 DVL3Q92997 716 aaPredicted RBP13.98□□□□□ -0.17
USP40-212ENST00000473191 SLCO4A1Q96BD0 722 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 CDADC1Q9BWV3 514 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 TMEM165Q9HC07 324 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 IL20Q9NYY1 176 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 ACTR3BQ9P1U1 418 aa13.98□□□□□ -0.17
USP40-212ENST00000473191 A0A0A6YYJ9 748 aa13.97□□□□□ -0.17
USP40-212ENST00000473191 J3QW42 95 aa13.97□□□□□ -0.17
USP40-212ENST00000473191 LCATP04180 440 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms