RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ICE1Q9Y2F5 2266 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 TRBV5-5A0A0J9YX44 114 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 DUXAA6NLW8 204 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 TAAR5O14804 337 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 NDUFS4O43181 175 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 CDC40O60508 579 aaKnown RBP eCLIP9.07□□□□□ -0.96
APTX-216ENST00000472896 THBS1P07996 1170 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 JMJD7P0C870 316 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 RAB4AP20338 218 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 ZBTB25P24278 435 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 CD1CP29017 333 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 IGFALSP35858 605 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 CX3CR1P49238 355 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 RNF4P78317 190 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 BIKQ13323 160 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MEF2DQ14814 521 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 AMZ1Q400G9 498 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PYY3Q5JQD4 70 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 NSUN5P2Q63ZY6 315 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 C22orf39Q6P5X5 142 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 BTNL8Q6UX41 500 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PARS2Q7L3T8 475 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 HMGN2P46Q86SG4 172 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 SFTPA2Q8IWL1 248 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PNLDC1Q8NA58 520 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 ZNF417Q8TAU3 575 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 C3orf49Q96BT1 292 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 F2RL3Q96RI0 385 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 NEU1Q99519 415 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 SMAD5Q99717 465 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 MAP3K3Q99759 626 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 NMES1Q9C002 83 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 ATG5Q9H1Y0 275 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 SYNPO2LQ9H987 977 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 PARP11Q9NR21 331 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MBNL1Q9NR56 388 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 GAR1Q9NY12 217 aaKnown RBP9.07□□□□□ -0.96
APTX-216ENST00000472896 SLC2A8Q9NY64 477 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 TP53TG5Q9Y2B4 290 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 MED31Q9Y3C7 131 aa9.07□□□□□ -0.96
APTX-216ENST00000472896 BSNQ9UPA5 3926 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 A0A0A6YYD5 115 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 C7orf77A4D0Y5 90 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 FAM157AC9JC47 383 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 TSTD3H0UI37 97 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 RTCAO00442 366 aaKnown RBP9.06□□□□□ -0.96
APTX-216ENST00000472896 TMPRSS11DO60235 418 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 F10P00742 488 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 IFNA2P01563 188 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 CRHP06850 196 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 FCGR3AP08637 254 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 TACSTD2P09758 323 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 LYL1P12980 280 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 PGAM2P15259 253 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 HPGDP15428 266 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 CEACAM6P40199 344 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 GSK3AP49840 483 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 FOXO1Q12778 655 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 ELAVL1Q15717 326 aaKnown RBP9.06□□□□□ -0.96
APTX-216ENST00000472896 LRRC37A5PQ49AS3 106 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 KRBOX4Q5JUW0 171 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 ALKBH2Q6NS38 261 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 DPPA4Q7L190 304 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 TMED4Q7Z7H5 227 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 ZNF740Q8NDX6 193 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 TMED6Q8WW62 240 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 DCUN1D4Q92564 292 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 CPNE2Q96FN4 548 aaPredicted RBP9.06□□□□□ -0.96
APTX-216ENST00000472896 SYT4Q9H2B2 425 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 HRH4Q9H3N8 390 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 RGCCQ9H4X1 137 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 CHMP1AQ9HD42 196 aaPredicted RBP9.06□□□□□ -0.96
APTX-216ENST00000472896 ZNF71Q9NQZ8 489 aaPredicted RBP9.06□□□□□ -0.96
APTX-216ENST00000472896 C5AR2Q9P296 337 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 CD84Q9UIB8 345 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 KCNE5Q9UJ90 142 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 NTNG1Q9Y2I2 539 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 FAM96BQ9Y3D0 163 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 CBY1Q9Y3M2 126 aa9.06□□□□□ -0.96
APTX-216ENST00000472896 TRAV18A0A075B6X5 111 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 A0A0A6YYH2 397 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 A6NJ64 397 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 A6NLC8 198 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 SEC14L6B5MCN3 397 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 ADAM10O14672 748 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 POP4O95707 220 aaKnown RBP9.05□□□□□ -0.96
APTX-216ENST00000472896 LY86O95711 162 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 TBX6O95947 436 aaPredicted RBP9.05□□□□□ -0.96
APTX-216ENST00000472896 HLA-AP01891 365 aaKnown RBP9.05□□□□□ -0.96
APTX-216ENST00000472896 ZNF735P0CB33 412 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 TMIGD3P0DMS9 266 aaPredicted RBP9.05□□□□□ -0.96
APTX-216ENST00000472896 CLUP10909 449 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 NDUFB7P17568 137 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 DIO1P49895 249 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 SULT1A2P50226 295 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 REEP5Q00765 189 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 ATXN7L3Q14CW9 347 aaPredicted RBP9.05□□□□□ -0.96
APTX-216ENST00000472896 ZNF658BQ4V348 819 aaPredicted RBP9.05□□□□□ -0.96
APTX-216ENST00000472896 OR4C11Q6IEV9 310 aa9.05□□□□□ -0.96
APTX-216ENST00000472896 DHRS11Q6UWP2 260 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms