RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 SLC25A40Q8TBP6 338 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 RNF133Q8WVZ7 376 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 SLC7A6Q92536 515 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 ZNF799Q96GE5 643 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 MARS2Q96GW9 593 aaKnown RBP12.98□□□□□ -0.33
SNX13-205ENST00000471744 CNN2Q99439 309 aaKnown RBP12.98□□□□□ -0.33
SNX13-205ENST00000471744 KCNJ15Q99712 375 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 SYT3Q9BQG1 590 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 ABHD6Q9BV23 337 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 C1QTNF5Q9BXJ0 243 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 RAB1BQ9H0U4 201 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 MS4A5Q9H3V2 200 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 SP140LQ9H930 580 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 CENPMQ9NSP4 180 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 FAM118AQ9NWS6 357 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 CGGBP1Q9UFW8 167 aaPredicted RBP12.98□□□□□ -0.33
SNX13-205ENST00000471744 DUSP13Q9UII6 198 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 LAMP5Q9UJQ1 280 aa12.98□□□□□ -0.33
SNX13-205ENST00000471744 LOC100130705A0A1B0GUX0 176 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 A0A1W2PPW3 197 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 PHYHO14832 338 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 NGFP01138 241 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 IGHV3-13P01766 116 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 PSKH1P11801 424 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 HTR1FP30939 366 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 LIPAP38571 399 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 NAA10P41227 235 aaPredicted RBP12.97□□□□□ -0.33
SNX13-205ENST00000471744 ERVS71-1P61550 626 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 SLC34A1Q06495 639 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 MSMPQ1L6U9 139 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 LPCAT4Q643R3 524 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 KCTD18Q6PI47 426 aaPredicted RBP12.97□□□□□ -0.33
SNX13-205ENST00000471744 SPNS3Q6ZMD2 512 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 COLCA1Q6ZS62 124 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 ZNF771Q7L3S4 317 aaPredicted RBP12.97□□□□□ -0.33
SNX13-205ENST00000471744 KLF14Q8TD94 323 aaPredicted RBP12.97□□□□□ -0.33
SNX13-205ENST00000471744 SNX33Q8WV41 574 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 ASB17Q8WXJ9 295 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 APOL4Q9BPW4 351 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 OR2J1Q9GZK6 312 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 NIPAL2Q9H841 368 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 RNPEPL1Q9HAU8 725 aa12.97□□□□□ -0.33
SNX13-205ENST00000471744 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNX13-205ENST00000471744 ALOX5APP20292 161 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 HSD11B1P28845 292 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 SLC6A9P48067 706 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 EFNA4P52798 201 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 OCLNQ16625 522 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 NKPD1Q17RQ9 610 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 RSPO1Q2MKA7 263 aaPredicted RBP12.96□□□□□ -0.33
SNX13-205ENST00000471744 ZMAT1Q5H9K5 638 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 Q5PR19 223 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 TTC23Q5W5X9 447 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 DEGS2Q6QHC5 323 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 BCDIN3DQ7Z5W3 292 aaKnown RBP12.96□□□□□ -0.33
SNX13-205ENST00000471744 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.96□□□□□ -0.33
SNX13-205ENST00000471744 THEM6Q8WUY1 208 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 NEU4Q8WWR8 484 aaPredicted RBP12.96□□□□□ -0.33
SNX13-205ENST00000471744 Q96MT0 163 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 ZNF582Q96NG8 517 aaPredicted RBP12.96□□□□□ -0.33
SNX13-205ENST00000471744 VRK1Q99986 396 aaPredicted RBP12.96□□□□□ -0.33
SNX13-205ENST00000471744 CYSLTR2Q9NS75 346 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 TAAR3PQ9P1P4 343 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 FZR1Q9UM11 496 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 STARD10Q9Y365 291 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 CSMD2Q7Z408 3487 aa12.96□□□□□ -0.33
SNX13-205ENST00000471744 LCATP04180 440 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 H2BFMP0C1H6 154 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 RAC2P15153 192 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 OPRL1P41146 370 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 MALLQ13021 153 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 SPATA46Q5T0L3 261 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 FBXW12Q6X9E4 464 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 LRP11Q86VZ4 500 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 DHRSXQ8N5I4 330 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 ZNF283Q8N7M2 679 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 ADGRL4Q9HBW9 690 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 MYOZ1Q9NP98 299 aaPredicted RBP12.95□□□□□ -0.34
SNX13-205ENST00000471744 CLN6Q9NWW5 311 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 DNAJC27Q9NZQ0 273 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 CSMD1Q96PZ7 3565 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 ITPR3Q14573 2671 aa12.95□□□□□ -0.34
SNX13-205ENST00000471744 PLSCR5A0PG75 271 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 DLGAP1O14490 977 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 ZNF254O75437 659 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 CLPTM1O96005 669 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 F12P00748 615 aaPredicted RBP12.94□□□□□ -0.34
SNX13-205ENST00000471744 IGHV4-39P01824 125 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 ADRA2AP08913 450 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 MRPL3P09001 348 aaKnown RBP12.94□□□□□ -0.34
SNX13-205ENST00000471744 CSF3P09919 207 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 SBK2P0C263 348 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 SELEP16581 610 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 KITLGP21583 273 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 ATP6V1E1P36543 226 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 MPV17P39210 176 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 PRKXP51817 358 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 DSCR9P59020 149 aa12.94□□□□□ -0.34
SNX13-205ENST00000471744 KRT77Q7Z794 578 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms