RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 RNF133Q8WVZ7 376 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 HRASLS5Q96KN8 279 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 KCNJ15Q99712 375 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 RHNO1Q9BSD3 238 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 ABHD6Q9BV23 337 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 DLL4Q9NR61 685 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 CYSLTR2Q9NS75 346 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 CENPMQ9NSP4 180 aa13.08□□□□□ -0.32
SDC3-203ENST00000471567 CCDC182A6NF36 153 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 SLC22A31A6NKX4 558 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 ANKRD65E5RJM6 399 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 E9PQ18 207 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 M0R135 149 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 SELENOFO60613 162 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 RAC2P15153 192 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 KITLGP21583 273 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 CDC42P60953 191 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 GRB2P62993 217 aaKnown RBP13.07□□□□□ -0.32
SDC3-203ENST00000471567 PCGF3Q3KNV8 242 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 DRAM2Q6UX65 266 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 FBXW12Q6X9E4 464 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 SLC16A9Q7RTY1 509 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 LURAP1LQ8IV03 231 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 GID4Q8IVV7 300 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 ZCCHC24Q8N2G6 241 aaKnown RBP13.07□□□□□ -0.32
SDC3-203ENST00000471567 TRUB1Q8WWH5 349 aaKnown RBP13.07□□□□□ -0.32
SDC3-203ENST00000471567 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 CMBLQ96DG6 245 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 ZNF799Q96GE5 643 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 IL4I1Q96RQ9 567 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 SLC29A1Q99808 456 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 COPS4Q9BT78 406 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 YIPF3Q9GZM5 350 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 HAO2Q9NYQ3 351 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 NKIRAS2Q9NYR9 191 aa13.07□□□□□ -0.32
SDC3-203ENST00000471567 PLSCR5A0PG75 271 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 TRIM64A6NGJ6 449 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 TRIM64BA6NI03 449 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 C17orf100A8MU93 164 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 M0R129 80 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 APOC1P02654 83 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 LCATP04180 440 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 LYNP07948 512 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 NAT2P11245 290 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 ANPEPP15144 967 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 PDLIM4P50479 330 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 MMP15P51511 669 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 PSG7Q13046 419 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 TNK1Q13470 666 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 GGTLC2Q14390 218 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 ZMAT1Q5H9K5 638 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 ZNF525Q8N782 197 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 FAM168AQ92567 244 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 C18orf12Q96KH6 178 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 TPK1Q9H3S4 243 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 POFUT1Q9H488 388 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 C8orf4Q9NR00 106 aa13.06□□□□□ -0.32
SDC3-203ENST00000471567 PURGQ9UJV8 347 aaKnown RBP13.06□□□□□ -0.32
SDC3-203ENST00000471567 LOC390937A0A1W2PQ73 354 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 H7C1Q1 480 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 NDUFS8O00217 210 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 TIMM8AO60220 97 aaPredicted RBP13.05□□□□□ -0.32
SDC3-203ENST00000471567 LY6HO94772 140 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 ADH4P08319 380 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 DAOP14920 347 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 ALOX5APP20292 161 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 OPRL1P41146 370 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 NAA10P41227 235 aaPredicted RBP13.05□□□□□ -0.32
SDC3-203ENST00000471567 SLC6A9P48067 706 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 ZNF81P51508 661 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 MALLQ13021 153 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 TMED1Q13445 227 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 RCN1Q15293 331 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 ALKBH6Q3KRA9 238 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 ZIK1Q3SY52 487 aaPredicted RBP13.05□□□□□ -0.32
SDC3-203ENST00000471567 TMEM255AQ5JRV8 349 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 BCDIN3DQ7Z5W3 292 aaKnown RBP13.05□□□□□ -0.32
SDC3-203ENST00000471567 NAA40Q86UY6 237 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 C10orf105Q8TEF2 133 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 UBASH3BQ8TF42 649 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 THEM6Q8WUY1 208 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 COX4I2Q96KJ9 171 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 RDH12Q96NR8 316 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 DIRC2Q96SL1 478 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 MNTQ99583 582 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 SP140LQ9H930 580 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 IMPAD1Q9NX62 359 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 PTTG3PQ9NZH4 202 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 WARS2Q9UGM6 360 aaKnown RBP13.05□□□□□ -0.32
SDC3-203ENST00000471567 LAMP5Q9UJQ1 280 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 TMEM14AQ9Y6G1 99 aa13.05□□□□□ -0.32
SDC3-203ENST00000471567 MED13LQ71F56 2210 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 CELSR1Q9NYQ6 3014 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 H2BFMP0C1H6 154 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 SLC25A16P16260 332 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 SELEP16581 610 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 HSD11B1P28845 292 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 HTR1FP30939 366 aa13.04□□□□□ -0.32
SDC3-203ENST00000471567 PRKXP51817 358 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms