RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 MRPL13Q9BYD1 178 aaKnown RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 TXLNGYQ9BZA5 131 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 FN3KRPQ9HA64 309 aa5.65□□□□□ -1.5
HDAC1-204ENST00000471488 STX18Q9P2W9 335 aaKnown RBP5.65□□□□□ -1.5
HDAC1-204ENST00000471488 TENM3Q9P273 2699 aa5.65□□□□□ -1.51
HDAC1-204ENST00000471488 COL7A1Q02388 2944 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 TRAV38-1A0A0B4J264 116 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 TRAPPC13A5PLN9 417 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 LGALS8O00214 317 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 FBP2O00757 339 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 SDHDO14521 159 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 SHOX2O60902 331 aaPredicted RBP5.64□□□□□ -1.51
HDAC1-204ENST00000471488 OR7A10O76100 309 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 SCG5P05408 212 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 ASAH2BP0C7U1 165 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 IDO1P14902 403 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 RPL4P36578 427 aaKnown RBP5.64□□□□□ -1.51
HDAC1-204ENST00000471488 PSMB10P40306 273 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 TAS2R41P59536 307 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 CTXN1P60606 82 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 GUCA2AQ02747 115 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 CYP51A1Q16850 503 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 CDONQ4KMG0 1287 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 KLHL22Q53GT1 634 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 ALG10Q5BKT4 473 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 ARMC4Q5T2S8 1044 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 OGFOD2Q6N063 350 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 SLC25A47Q6Q0C1 308 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 TMEM255BQ8WV15 326 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 SPRYD4Q8WW59 207 aaPredicted RBP5.64□□□□□ -1.51
HDAC1-204ENST00000471488 DPF1Q92782 380 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF583Q96ND8 569 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 SORT1Q99523 831 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 NPFFR1Q9GZQ6 430 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 PAIP1Q9H074 479 aaKnown RBP5.64□□□□□ -1.51
HDAC1-204ENST00000471488 FAM234AQ9H0X4 552 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 PCDHAC1Q9H158 963 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 SMURF2Q9HAU4 748 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 KCNK9Q9NPC2 374 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 POLE4Q9NR33 117 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 C1orf123Q9NWV4 160 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 RNF7Q9UBF6 113 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 NOTCH3Q9UM47 2321 aa5.64□□□□□ -1.51
HDAC1-204ENST00000471488 TRBV23-1A0A0A0MS06 115 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 A0A1B0GW55 424 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 A0A1W2PQ09 198 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 OOEPA6NGQ2 149 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 TRPC5OSA6NMA1 111 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 EVPLLA8MZ36 301 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 CENPBD1B2RD01 187 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 HDAC3O15379 428 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 MT-ND1P03886 318 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 THY1P04216 161 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 CCDC159P0C7I6 412 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4L2P0CJ85 424 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4L3P0CJ86 424 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4L4P0CJ87 422 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4L5P0CJ88 424 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4L6P0CJ89 424 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4L7P0CJ90 424 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF26P17031 533 aaPredicted RBP5.63□□□□□ -1.51
HDAC1-204ENST00000471488 TUBG1P23258 451 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 CA6P23280 308 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 BMXP51813 675 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 KRTAP10-11P60412 298 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 STX1BP61266 288 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 RPL27P61353 136 aaKnown RBP5.63□□□□□ -1.51
HDAC1-204ENST00000471488 SLC35A2P78381 396 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 ELF3P78545 371 aaPredicted RBP5.63□□□□□ -1.51
HDAC1-204ENST00000471488 MAB21L1Q13394 359 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 NPTX1Q15818 432 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUSP7Q16829 419 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF181Q2M3W8 571 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 CLEC12AQ5QGZ9 265 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 C11orf88Q6PI97 169 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4L9Q6RFH8 374 aaPredicted RBP5.63□□□□□ -1.51
HDAC1-204ENST00000471488 ZNF826PQ6ZT77 177 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 MEPCEQ7L2J0 689 aaKnown RBP5.63□□□□□ -1.51
HDAC1-204ENST00000471488 RNF144BQ7Z419 303 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 NDUFA11Q86Y39 141 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 NKAIN4Q8IVV8 208 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 OR1F12Q8NHA8 337 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 C10orf82Q8WW14 230 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 C17orf50Q8WW18 174 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 GTF2H4Q92759 462 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 SLCO4A1Q96BD0 722 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 RASD2Q96D21 266 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 CCL13Q99616 98 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 ASCL2Q99929 193 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 B9D2Q9BPU9 175 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 ADAT1Q9BUB4 502 aaKnown RBP5.63□□□□□ -1.51
HDAC1-204ENST00000471488 CHID1Q9BWS9 393 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 TXNIPQ9H3M7 391 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 RAB18Q9NP72 206 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 PALMDQ9NP74 551 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 MEPEQ9NQ76 525 aaPredicted RBP5.63□□□□□ -1.51
HDAC1-204ENST00000471488 TUBG2Q9NRH3 451 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 C20orf141Q9NUB4 165 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 DUX4Q9UBX2 424 aa5.63□□□□□ -1.51
HDAC1-204ENST00000471488 RPUSD1Q9UJJ7 312 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms