RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 ZNF696Q9H7X3 374 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 SRA1Q9HD15 236 aaKnown RBP7.8□□□□□ -1.16
SF3A1-206ENST00000471037 CCNB1IP1Q9NPC3 277 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 PSORS1C1Q9UIG5 152 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 B9D1Q9UPM9 204 aa7.8□□□□□ -1.16
SF3A1-206ENST00000471037 A0A096LPE4 126 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 IGHV2OR16-5A0A0B4J2B6 119 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 A0A1W2PPZ6 126 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 TMEM129A0AVI4 362 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 DCTN6O00399 190 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 XPNPEP2O43895 674 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 MRPS14O60783 128 aaKnown RBP7.79□□□□□ -1.16
SF3A1-206ENST00000471037 CELA3BP08861 270 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 QDPRP09417 244 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 CFPP27918 469 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 GSTT1P30711 240 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 PYCR1P32322 319 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 THBS4P35443 961 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 ARR3P36575 388 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF84P51523 738 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 SLC35A2P78381 396 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 ROR2Q01974 943 aaKnown RBP7.79□□□□□ -1.16
SF3A1-206ENST00000471037 FMODQ06828 376 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 RAB40BQ12829 278 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 LINC01590Q5TEZ4 76 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 LRFN4Q6PJG9 635 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 C12orf54Q6X4T0 127 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 GLB1L2Q8IW92 636 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 CCDC36Q8IYA8 594 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 ZCCHC24Q8N2G6 241 aaKnown RBP7.79□□□□□ -1.16
SF3A1-206ENST00000471037 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.79□□□□□ -1.16
SF3A1-206ENST00000471037 IL17RDQ8NFM7 739 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 SEMA6DQ8NFY4 1073 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 OR6K6Q8NGW6 343 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 UBASH3BQ8TF42 649 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 MYDGFQ969H8 173 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 TSSK2Q96PF2 358 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 DUSP21Q9H596 190 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 RERGLQ9H628 205 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 AMBNQ9NP70 447 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 FKBP14Q9NWM8 211 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 BOLA1Q9Y3E2 137 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 PCDHGB1Q9Y5G3 927 aa7.79□□□□□ -1.16
SF3A1-206ENST00000471037 IGKV1D-43A0A0B4J1Z2 117 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 MAGEA13PA6NCF6 341 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 ZNF503-AS2A6NEH8 195 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 B4DSR2 109 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 PTGES3LE9PB15 166 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 DHHO43323 396 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 WIPF1O43516 503 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 VENTXO95231 258 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 FADS2O95864 444 aaKnown RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 HLA-DQA2P01906 255 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 LYNP07948 512 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 SBK2P0C263 348 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 GAAP10253 952 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 EEF1B2P24534 225 aaKnown RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 LAP3P28838 519 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 ATP6V1E1P36543 226 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 GUCA1AP43080 201 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 EVX1P49640 407 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 COMPP49747 757 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 ACTC1P68032 377 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 ACTA1P68133 377 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 ARF1P84077 181 aaKnown RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 HSF2Q03933 536 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 PHYHD1Q5SRE7 291 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 FOXL2NBQ6ZUU3 175 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 AHSA2Q719I0 299 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 STX19Q8N4C7 294 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 SLC26A10Q8NG04 563 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 OR51L1Q8NGJ5 315 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 OR51G2Q8NGK0 314 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 NSMAFQ92636 917 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 GGHQ92820 318 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 LGALS12Q96DT0 336 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 ZMYND19Q96E35 227 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 CNN2Q99439 309 aaKnown RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 MNTQ99583 582 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 COPS4Q9BT78 406 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 JAM3Q9BX67 310 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 MARCH7Q9H992 704 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 ADGRL4Q9HBW9 690 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 NOX3Q9HBY0 568 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 CRLF2Q9HC73 371 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 FGF20Q9NP95 211 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 DYNLRB1Q9NP97 96 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 KCNG2Q9UJ96 466 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 METRNQ9UJH8 293 aa7.78□□□□□ -1.16
SF3A1-206ENST00000471037 EXOGQ9Y2C4 368 aaKnown RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 COA3Q9Y2R0 106 aaPredicted RBP7.78□□□□□ -1.16
SF3A1-206ENST00000471037 A0A087WXM4 84 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 A0A1W2PPL8 197 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 ZNF99A8MXY4 864 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SPRY1O43609 319 aaPredicted RBP7.77□□□□□ -1.17
SF3A1-206ENST00000471037 RGS10O43665 173 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 SYNGR3O43761 229 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 RAB36O95755 333 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 CDK1P06493 297 aa7.77□□□□□ -1.17
SF3A1-206ENST00000471037 RPSAP08865 295 aaKnown RBP7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms