RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 PRR3P79522 188 aaKnown RBP2.31□□□□□ -2.04
BRCA2-202ENST00000470094 TCP10Q12799 353 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 CDH17Q12864 832 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 SLC39A6Q13433 755 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 EIF4EBP1Q13541 118 aaPredicted RBP2.31□□□□□ -2.04
BRCA2-202ENST00000470094 QPRTQ15274 297 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 SHHQ15465 462 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 TSC22D1Q15714 1073 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 ADNP2Q6IQ32 1131 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 SLC25A25Q6KCM7 469 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 C6orf120Q7Z4R8 191 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 HORMAD1Q86X24 394 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 VKORC1L1Q8N0U8 176 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 FAM58AQ8N1B3 248 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 SPERTQ8NA61 448 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 GATSQ8NAP1 163 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 DRAXINQ8NBI3 349 aaPredicted RBP2.31□□□□□ -2.04
BRCA2-202ENST00000470094 FBXO36Q8NEA4 188 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 OR51L1Q8NGJ5 315 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 OR13C9Q8NGT0 318 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 OR51E1Q8TCB6 317 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 ISOC2Q96AB3 205 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 GALNT14Q96FL9 552 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 FOXC2Q99958 501 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 SIKE1Q9BRV8 207 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 HDHD3Q9BSH5 251 aaPredicted RBP2.31□□□□□ -2.04
BRCA2-202ENST00000470094 GAL3ST2Q9H3Q3 398 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 CD209Q9NNX6 404 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 DMAP1Q9NPF5 467 aaPredicted RBP2.31□□□□□ -2.04
BRCA2-202ENST00000470094 NECAP2Q9NVZ3 263 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 MCUBQ9NWR8 336 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 ZNF282Q9UDV7 671 aaPredicted RBP2.31□□□□□ -2.04
BRCA2-202ENST00000470094 CD84Q9UIB8 345 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 CFAP45Q9UL16 551 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 DDX19BQ9UMR2 479 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 ADGRA3Q8IWK6 1321 aa2.31□□□□□ -2.04
BRCA2-202ENST00000470094 A0A1W2PQ67 120 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CENPXA8MT69 81 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 LAD1O00515 517 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 NME4O00746 187 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 ERI3O43414 337 aaKnown RBP2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CD5LO43866 347 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 TDP2O95551 362 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 HPRT1P00492 218 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 ATF6P18850 670 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 RAB3BP20337 219 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 OMGP23515 440 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CXCL5P42830 114 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 NMUP48645 174 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 FABP6P51161 128 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CRISP3P54108 245 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CLDN6P56747 220 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 HMGCS1Q01581 520 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 SEMG2Q02383 582 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 DMTNQ08495 405 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 MADCAM1Q13477 382 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 PIGGQ5H8A4 983 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 THEM4Q5T1C6 240 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 NPSR1Q6W5P4 371 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 C12orf54Q6X4T0 127 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 LINC00336Q6ZUF6 198 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 ABHD13Q7L211 337 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 MRPL55Q7Z7F7 128 aaKnown RBP2.3□□□□□ -2.04
BRCA2-202ENST00000470094 FAM71AQ8IYT1 594 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 ZNF561Q8N587 486 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CSGALNACT2Q8N6G5 542 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CHST4Q8NCG5 386 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 ITFG1Q8TB96 612 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 ZNF596Q8TC21 504 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CREB3L1Q96BA8 519 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 LRRC39Q96DD0 335 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 NRBF2Q96F24 287 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 ZBED3Q96IU2 234 aaPredicted RBP2.3□□□□□ -2.04
BRCA2-202ENST00000470094 LZTS2Q9BRK4 669 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 TMEM175Q9BSA9 504 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 PARP12Q9H0J9 701 aaKnown RBP2.3□□□□□ -2.04
BRCA2-202ENST00000470094 LINC00597Q9H2U6 94 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 CDC42EP4Q9H3Q1 356 aaKnown RBP2.3□□□□□ -2.04
BRCA2-202ENST00000470094 MRM3Q9HC36 420 aaKnown RBP2.3□□□□□ -2.04
BRCA2-202ENST00000470094 TBX21Q9UL17 535 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 KPTNQ9Y664 436 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 GAKO14976 1311 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 MAP3K15Q6ZN16 1313 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 NEURL4Q96JN8 1562 aa2.3□□□□□ -2.04
BRCA2-202ENST00000470094 WDR62O43379 1518 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 LINC00854A0A1B0GVQ3 168 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 LRCOL1A6NCL2 159 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 ZNF879B4DU55 563 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 SLC19A2O60779 497 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 SS18L1O75177 396 aaPredicted RBP2.29□□□□□ -2.04
BRCA2-202ENST00000470094 ETHE1O95571 254 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 FABP3P05413 133 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 EIF4EP06730 217 aaKnown RBP2.29□□□□□ -2.04
BRCA2-202ENST00000470094 RETP07949 1114 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 ERGP11308 486 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 GFAPP14136 432 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 CD9P21926 228 aa2.29□□□□□ -2.04
BRCA2-202ENST00000470094 WARSP23381 471 aaKnown RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms