RNA–Protein interactions for RNA: ENST00000469534.1

ITGA6-208, Transcript of integrin subunit alpha 6, humanhuman

TSL 2

Gene ITGA6, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-208ENST00000469534 CEACAM8P31997 349 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 KIR3DL2P43630 455 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 HTR5AP47898 357 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 SLC6A9P48067 706 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 SOX2P48431 317 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 CX3CR1P49238 355 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 GDI2P50395 445 aaKnown RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 IDH3GP51553 393 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 RIDAP52758 137 aaKnown RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 GBX2P52951 348 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 CASP6P55212 293 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 NANOS3P60323 173 aaKnown RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 VBP1P61758 197 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 NCS1P62166 190 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 ACTC1P68032 377 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 ACTA1P68133 377 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 PSG4Q00888 419 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 TLE1Q04724 770 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 HGFACQ04756 655 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 EGR3Q06889 387 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 FAM27E3Q08E93 113 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 TMED1Q13445 227 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 GUSBP1Q15486 140 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 CDSNQ15517 529 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 TBRG1Q3YBR2 411 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 CDONQ4KMG0 1287 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 DMRTC1Q5HYR2 192 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 PABPC1L2AQ5JQF8 200 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 UBE2UQ5VVX9 321 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 LIPNQ5VXI9 398 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 OR2A2Q6IF42 318 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 FOXL2NBQ6ZUU3 175 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 FAM57BQ71RH2 274 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 BHLHA15Q7RTS1 189 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 MDP1Q86V88 176 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 MYPOPQ86VE0 399 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 ZNF433Q8N7K0 673 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 OR6K3Q8NGY3 331 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 OR10AC1Q8NH08 325 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 OR52N1Q8NH53 320 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 ST7LQ8TDW4 575 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 BCL2L2Q92843 193 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 UFD1Q92890 307 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 YIPF6Q96EC8 236 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 NKX3-1Q99801 234 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 PDCD1LG2Q9BQ51 273 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 SOX7Q9BT81 388 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 FUNDC2Q9BWH2 189 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 LINC00470Q9BZP3 86 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 WNT5BQ9H1J7 359 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 C1orf198Q9H425 327 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 PNRC2Q9NPJ4 139 aaKnown RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 GLRX2Q9NS18 164 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 PLEK2Q9NYT0 353 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 ZNF224Q9NZL3 707 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 CYB5R1Q9UHQ9 305 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 ST6GALNAC2Q9UJ37 374 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 MEMO1Q9Y316 297 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 CAB39Q9Y376 341 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 PCDHGB1Q9Y5G3 927 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 CEPT1Q9Y6K0 416 aa4.56□□□□□ -1.68
ITGA6-208ENST00000469534 RP1L1Q8IWN7 2480 aaPredicted RBP4.56□□□□□ -1.68
ITGA6-208ENST00000469534 HCFC1P51610 2035 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 TRBV2A0A0J9YWF9 115 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 TMEM129A0AVI4 362 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 CENPBD1B2RD01 187 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ZNF878C9JN71 531 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 E9PLN8 166 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 LOC110117498-PIK3R3F6TDL0 507 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 M0R1B8 84 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 SGCEO43556 437 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 TMCC2O75069 709 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 GPX5O75715 221 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 FARS2O95363 451 aaKnown RBP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 PF4P02776 101 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 CST2P09228 141 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 CLEC2LP0C7M8 214 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 IL32P24001 234 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 MPGP29372 298 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 TIMP3P35625 211 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 CA7P43166 264 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ZNF83P51522 516 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ZNF133P52736 654 aaPredicted RBP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 BLVRAP53004 296 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 CAV3P56539 151 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ZNF121P58317 390 aaPredicted RBP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 UBE2NP61088 152 aaKnown RBP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ACTA2P62736 377 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ACTG2P63267 376 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 MRPS34P82930 218 aaKnown RBP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ADORA2A-AS1P86434 159 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 MLLT11Q13015 90 aaPredicted RBP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 AQP6Q13520 282 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ALKBH1Q13686 389 aaKnown RBP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 SF3B4Q15427 424 aaKnown RBP eCLIP4.55□□□□□ -1.68
ITGA6-208ENST00000469534 GABRA6Q16445 453 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 WDR38Q5JTN6 314 aa4.55□□□□□ -1.68
ITGA6-208ENST00000469534 ELFN2Q5R3F8 820 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms