RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 GLO1Q04760 184 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 EBPQ15125 230 aaKnown RBP10.78□□□□□ -0.68
VARS2-205ENST00000469358 SLC9A3R2Q15599 337 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 RSPO4Q2I0M5 234 aaPredicted RBP10.78□□□□□ -0.68
VARS2-205ENST00000469358 GFOD2Q3B7J2 385 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 LYG2Q86SG7 212 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 LMX1AQ8TE12 382 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 MAFIPQ8WZ33 124 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 TCTN2Q96GX1 697 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 EDEM2Q9BV94 578 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 GAREM1Q9H706 876 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 TMEM150CB9EJG8 249 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 PHYHO14832 338 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 ZNF354AO60765 605 aaPredicted RBP10.78□□□□□ -0.68
VARS2-205ENST00000469358 TMEM127O75204 238 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 IGKV3-11P04433 115 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 ABCD3P28288 659 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 SERPINF1P36955 418 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 CAPZBP47756 277 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 CCINQ13939 588 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 ZNF260Q3ZCT1 412 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 HLA-DQA1Q5Y7H0 255 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 LDLRAD3Q86YD5 345 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 ASB17Q8WXJ9 295 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 BANF2Q9H503 90 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 GLS2Q9UI32 602 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 CD207Q9UJ71 328 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 FAM96BQ9Y3D0 163 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 CSAG2Q9Y5P2 127 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 R4GMQ9 66 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 PHF3Q92576 2039 aaKnown RBP10.78□□□□□ -0.68
VARS2-205ENST00000469358 MSGN1A6NI15 193 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 OR5K4A6NMS3 321 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 SRSF10O75494 262 aaKnown RBP10.78□□□□□ -0.68
VARS2-205ENST00000469358 CD74P04233 296 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 VSIG8P0DPA2 414 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 ZNF823P16415 610 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 AGTR1P30556 359 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 NPY4RP50391 375 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 POU3F1Q03052 451 aaPredicted RBP10.78□□□□□ -0.68
VARS2-205ENST00000469358 PAN3Q58A45 887 aaKnown RBP10.78□□□□□ -0.68
VARS2-205ENST00000469358 ACOT7LQ6ZUV0 252 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 ARMC10Q8N2F6 343 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 TMEM104Q8NE00 496 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 DCUN1D4Q92564 292 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 SLC46A1Q96NT5 459 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 NKX2-4Q9H2Z4 354 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 OR2S2Q9NQN1 319 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 RHBDD3Q9Y3P4 386 aa10.78□□□□□ -0.68
VARS2-205ENST00000469358 LRP4O75096 1905 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 FRG2CA6NGY1 282 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 ZNF208O43345 1280 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 ABOP16442 354 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 INPP5JQ15735 1006 aaPredicted RBP10.77□□□□□ -0.68
VARS2-205ENST00000469358 FOXRED2Q8IWF2 684 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 THAP6Q8TBB0 222 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 ST7LQ8TDW4 575 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 AQP3Q92482 292 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 CUTCQ9NTM9 273 aa10.77□□□□□ -0.68
VARS2-205ENST00000469358 H0YIZ8 118 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 OR2T1O43869 369 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 SSX5O60225 188 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 SLC25A42Q86VD7 318 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.77□□□□□ -0.69
VARS2-205ENST00000469358 SLC17A5Q9NRA2 495 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 CLEC1BQ9P126 229 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 HS3ST3A1Q9Y663 406 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 DMDP11532 3685 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 EFSO43281 561 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 DXOO77932 396 aaKnown RBP10.77□□□□□ -0.69
VARS2-205ENST00000469358 OR2F2O95006 317 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 BCKDHBP21953 392 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 FOXK1P85037 733 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 OR2F1Q13607 317 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 SHHQ15465 462 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 STK11Q15831 433 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 COMMD2Q86X83 199 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 INO80EQ8NBZ0 244 aaPredicted RBP10.77□□□□□ -0.69
VARS2-205ENST00000469358 OR5AP2Q8NGF4 316 aa10.77□□□□□ -0.69
VARS2-205ENST00000469358 PELOQ9BRX2 385 aaKnown RBP10.77□□□□□ -0.69
VARS2-205ENST00000469358 VSX1Q9NZR4 365 aaPredicted RBP10.77□□□□□ -0.69
VARS2-205ENST00000469358 MS4A18H0YCH9 400 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 ATG12O94817 140 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 H2BFMP0C1H6 154 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 PGCP20142 388 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 CDAP32320 146 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 MS4A18Q3C1V0 323 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 TMEM17Q86X19 198 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 ANGPTL5Q86XS5 388 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 ZNF101Q8IZC7 436 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 ZFP82Q8N141 532 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 OR5D18Q8NGL1 313 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 OR10R2Q8NGX6 335 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 C2CD4CQ8TF44 421 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 KLHDC7BQ96G42 594 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 TLNRD1Q9H1K6 362 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 PDE7BQ9NP56 450 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 MKL2Q9ULH7 1088 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 ABCA7Q8IZY2 2146 aa10.76□□□□□ -0.69
VARS2-205ENST00000469358 SOCS1O15524 211 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms