RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CDADC1Q9BWV3 514 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 IL19Q9UHD0 177 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 KCNG2Q9UJ96 466 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 METRNQ9UJH8 293 aa16.16■□□□□ 0.18
COL7A1-207ENST00000467985 H0YHG0 523 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 GPANK1O95872 356 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 PNPP00491 289 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 DBHP09172 617 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 KRTAP24-1Q3LI83 254 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 SLC27A4Q6P1M0 643 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 FAHD2BQ6P2I3 314 aaPredicted RBP16.15■□□□□ 0.18
COL7A1-207ENST00000467985 Q6ZR03 302 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 OR52E2Q8NGJ4 325 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 OR2AJ1Q8NGZ0 328 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 FAHD2AQ96GK7 314 aa16.15■□□□□ 0.18
COL7A1-207ENST00000467985 A0A0G2JMP0 313 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 A0A0X1KG70 313 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 ISPDA4D126 451 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 OR6C68A6NDL8 312 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 J3QLI3 93 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 IFNL4K9M1U5 179 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 PLPP2O43688 288 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 CCNB2O95067 398 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 HLA-DQA2P01906 255 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 GATA3P23771 443 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL7A1-207ENST00000467985 CLEC12AQ5QGZ9 265 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 SLC35F1Q5T1Q4 408 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 SLC18B1Q6NT16 456 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 CORO6Q6QEF8 472 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 SDR9C7Q8NEX9 313 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 OR4M2Q8NGB6 313 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 REPIN1Q9BWE0 567 aaKnown RBP16.14■□□□□ 0.17
COL7A1-207ENST00000467985 CHID1Q9BWS9 393 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 EGLN3Q9H6Z9 239 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 G6PC2Q9NQR9 355 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 TMEM106BQ9NUM4 274 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 IL20Q9NYY1 176 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 PTTG3PQ9NZH4 202 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 CYB5R1Q9UHQ9 305 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 NPTNQ9Y639 398 aa16.14■□□□□ 0.17
COL7A1-207ENST00000467985 BHLHE40O14503 412 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 GNGT2O14610 69 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 FKBP6O75344 327 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 SELEP16581 610 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 ZNF770Q6IQ21 691 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-207ENST00000467985 ZFP1Q6P2D0 407 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 COLCA1Q6ZS62 124 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 RASSF6Q6ZTQ3 369 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 ZNF283Q8N7M2 679 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 OR8G5Q8NG78 346 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 OR9Q2Q8NGE9 314 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 OR4C15Q8NGM1 316 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 OR13G1Q8NGZ3 307 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 OR2T4Q8NH00 348 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 ST7LQ8TDW4 575 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 ZNF582Q96NG8 517 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-207ENST00000467985 PITX2Q99697 317 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 ATF6BQ99941 703 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 C19orf24Q9BVV8 132 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 HCAR1Q9BXC0 346 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 C1QTNF5Q9BXJ0 243 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 METTL17Q9H7H0 456 aaPredicted RBP16.13■□□□□ 0.17
COL7A1-207ENST00000467985 PPP1R3CQ9UQK1 317 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 AP4S1Q9Y587 144 aa16.13■□□□□ 0.17
COL7A1-207ENST00000467985 A0A0A6YYJ9 748 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 IGHV2-70P01814 119 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 ZNF823P16415 610 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 GGT2P36268 569 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 GK3PQ14409 553 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 HLXQ14774 488 aaPredicted RBP16.12■□□□□ 0.17
COL7A1-207ENST00000467985 KRTAP27-1Q3LI81 207 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 SPRNQ5BIV9 151 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 CFAP77Q6ZQR2 320 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 LINC00346Q8IVM7 164 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 SPICQ8N5J4 248 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 ATG16L2Q8NAA4 619 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 PROKR2Q8NFJ6 384 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 PYDC1Q8WXC3 89 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 FN3KQ9H479 309 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 REEP1Q9H902 201 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 UBAP1Q9NZ09 502 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 BAIAP2Q9UQB8 552 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 DYSFO75923 2080 aa16.12■□□□□ 0.17
COL7A1-207ENST00000467985 CST1P01037 141 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 GASTP01350 101 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 ACSM4P0C7M7 580 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 FCGR1AP12314 374 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 MALLQ13021 153 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 RSPO1Q2MKA7 263 aaPredicted RBP16.11■□□□□ 0.17
COL7A1-207ENST00000467985 TMEM155Q4W5P6 130 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 DCAF12L2Q5VW00 463 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 OR2T5Q6IEZ7 315 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 OR2T2Q6IF00 324 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 OR5AS1Q8N127 324 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 LNX2Q8N448 690 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 KLHL36Q8N4N3 616 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 AQP11Q8NBQ7 271 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 OR2T29Q8NH02 315 aa16.11■□□□□ 0.17
COL7A1-207ENST00000467985 ITLN1Q8WWA0 313 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms