RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 FAM162AQ96A26 154 aa14.44□□□□□ -0.1
TRIM56-203ENST00000467847 NEIL1Q96FI4 390 aaPredicted RBP14.44□□□□□ -0.1
TRIM56-203ENST00000467847 RSRC1Q96IZ7 334 aaKnown RBP14.44□□□□□ -0.1
TRIM56-203ENST00000467847 OR8B2Q96RD0 313 aa14.44□□□□□ -0.1
TRIM56-203ENST00000467847 COQ7Q99807 217 aa14.44□□□□□ -0.1
TRIM56-203ENST00000467847 SLC30A2Q9BRI3 323 aa14.44□□□□□ -0.1
TRIM56-203ENST00000467847 TMEM246Q9BRR3 403 aa14.44□□□□□ -0.1
TRIM56-203ENST00000467847 WDR76Q9H967 626 aa14.44□□□□□ -0.1
TRIM56-203ENST00000467847 FAM32AQ9Y421 112 aaKnown RBP14.44□□□□□ -0.1
TRIM56-203ENST00000467847 LHFPL6Q9Y693 200 aa14.44□□□□□ -0.1
TRIM56-203ENST00000467847 TRAV40A0A0B4J280 105 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 POM121CA8CG34 1229 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 IQCF6A8MYZ5 107 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 MLNRO43193 412 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 SASH3O75995 380 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 PLATP00750 562 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 NCK1P16333 377 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 CRABP1P29762 137 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 CDKN2AP42771 156 aaKnown RBP14.43□□□□□ -0.1
TRIM56-203ENST00000467847 OMPP47874 163 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 GSK3BP49841 420 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 RPS6KA3P51812 740 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 HIST1H3AP68431 136 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 ZNF181Q2M3W8 571 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 ZNF404Q494X3 552 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 HIST2H3PS2Q5TEC6 136 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 PGM2L1Q6PCE3 622 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 DNM1P34Q6PK57 102 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 DPY19L2P2Q6ZN68 376 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 HIST2H3AQ71DI3 136 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 C1orf87Q8N0U7 546 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 TAF15Q92804 592 aaKnown RBP eCLIP14.43□□□□□ -0.1
TRIM56-203ENST00000467847 TSSK2Q96PF2 358 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 HOPXQ9BPY8 73 aaPredicted RBP14.43□□□□□ -0.1
TRIM56-203ENST00000467847 HCAR1Q9BXC0 346 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 KRCC1Q9NPI7 259 aaPredicted RBP14.43□□□□□ -0.1
TRIM56-203ENST00000467847 TMEM100Q9NV29 134 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 AURKCQ9UQB9 309 aa14.43□□□□□ -0.1
TRIM56-203ENST00000467847 UNC119BA6NIH7 251 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 TXNDC12O95881 172 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 HLA-DPB1P04440 258 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 COX4I1P13073 169 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 IRF2P14316 349 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 H2AFXP16104 143 aaPredicted RBP14.42□□□□□ -0.1
TRIM56-203ENST00000467847 SELEP16581 610 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 FPR3P25089 353 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 PITPNBP48739 271 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 FXYD6P3P58550 94 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 MIDNQ504T8 468 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 FAM201AQ5SY85 155 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 DACT3Q96B18 629 aaPredicted RBP14.42□□□□□ -0.1
TRIM56-203ENST00000467847 KCTD14Q9BQ13 255 aaPredicted RBP14.42□□□□□ -0.1
TRIM56-203ENST00000467847 NDUFAF4Q9P032 175 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 RPS6KA6Q9UK32 745 aa14.42□□□□□ -0.1
TRIM56-203ENST00000467847 TRBV4-1A0A0J9YWV2 114 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 KIR2DS1A0A191URI9 304 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 MDFIC2A0A1B0GVS7 189 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 DCTN6O00399 190 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 FSTL3O95633 263 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 PPP1R3DO95685 299 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 RHCEP18577 417 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 PMELP40967 661 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 PRSS12P56730 875 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 COX10Q12887 443 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 SEC23BQ15437 767 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 SMARCD3Q6STE5 483 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 TREML4Q6UXN2 200 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 SPATC1Q76KD6 591 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 ERMAPQ96PL5 475 aaPredicted RBP14.41□□□□□ -0.1
TRIM56-203ENST00000467847 NUDT16L1Q9BRJ7 211 aaKnown RBP14.41□□□□□ -0.1
TRIM56-203ENST00000467847 EFCAB1Q9HAE3 211 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 CLN8Q9UBY8 286 aa14.41□□□□□ -0.1
TRIM56-203ENST00000467847 IGLV1-36A0A0B4J1U3 117 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 A0A1B0GWJ7 208 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 NDUFAB1O14561 156 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 HOXA3O43365 443 aaPredicted RBP14.4□□□□□ -0.1
TRIM56-203ENST00000467847 MDKP21741 143 aaPredicted RBP14.4□□□□□ -0.1
TRIM56-203ENST00000467847 OMGP23515 440 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 GATA4P43694 442 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 RSPO1Q2MKA7 263 aaPredicted RBP14.4□□□□□ -0.1
TRIM56-203ENST00000467847 C8orf82Q6P1X6 216 aaPredicted RBP14.4□□□□□ -0.1
TRIM56-203ENST00000467847 C16orf87Q6PH81 154 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 BRD3OSQ6XYD6 125 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 DCDC5Q6ZRR9 648 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 COLCA1Q6ZS62 124 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 LINC00346Q8IVM7 164 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 OR6V1Q8N148 313 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 OR10S1Q8NGN2 331 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 OR52J3Q8NH60 311 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 FANK1Q8TC84 345 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 ZDHHC16Q969W1 377 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 TMIGD2Q96BF3 282 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 PITX2Q99697 317 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 SLITRK2Q9H156 845 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 SRA1Q9HD15 236 aaKnown RBP14.4□□□□□ -0.1
TRIM56-203ENST00000467847 B9D1Q9UPM9 204 aa14.4□□□□□ -0.1
TRIM56-203ENST00000467847 F5H5K5 113 aa14.39□□□□□ -0.11
TRIM56-203ENST00000467847 PHYHO14832 338 aa14.39□□□□□ -0.11
TRIM56-203ENST00000467847 DIRAS1O95057 198 aa14.39□□□□□ -0.11
TRIM56-203ENST00000467847 RENP00797 406 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms