RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 HSD17B8Q92506 261 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 S100PBPQ96BU1 408 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 MUCL1Q96DR8 90 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 FOXN4Q96NZ1 517 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 SLC17A5Q9NRA2 495 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 MRPL22Q9NWU5 206 aaKnown RBP12.89□□□□□ -0.35
DDX56-208ENST00000467318 AMDHD2Q9Y303 409 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 HELZ2Q9BYK8 2649 aaKnown RBP12.89□□□□□ -0.35
DDX56-208ENST00000467318 CACNA1CQ13936 2221 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 CCDC182A6NF36 153 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 C12orf71A8MTZ7 269 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 UBL3O95164 117 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 GPANK1O95872 356 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 WNT11O96014 354 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 IGHA1P01876 353 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 LIMS3P0CW19 117 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 LIMS4P0CW20 117 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 CCKARP32238 428 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 ATP6V1E1P36543 226 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 PPP3R1P63098 170 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 ADAM8P78325 824 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 PCK2Q16822 640 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 C22orf42Q6IC83 251 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 ZNF544Q6NX49 715 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 MZT2AQ6P582 158 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 TIGD4Q8IY51 512 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 GATAD2BQ8WXI9 593 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 INTS14Q96SY0 518 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 SDHCQ99643 169 aaPredicted RBP12.89□□□□□ -0.35
DDX56-208ENST00000467318 ZNF416Q9BWM5 594 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 INPP5EQ9NRR6 644 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 ADAM30Q9UKF2 790 aa12.89□□□□□ -0.35
DDX56-208ENST00000467318 TVP23AA6NH52 213 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 ZNF593O00488 134 aaPredicted RBP12.88□□□□□ -0.35
DDX56-208ENST00000467318 ATP6V1G1O75348 118 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 CD53P19397 219 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 TPTEP56180 551 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 DOC2BQ14184 412 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 ENDOGQ14249 297 aaKnown RBP12.88□□□□□ -0.35
DDX56-208ENST00000467318 MEP1BQ16820 701 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 B3GLCTQ6Y288 498 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 CNN2Q99439 309 aaKnown RBP12.88□□□□□ -0.35
DDX56-208ENST00000467318 SRRQ9GZT4 340 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 WDR76Q9H967 626 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 EMC7Q9NPA0 242 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 ERVK13-1Q9NX77 482 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 CYB5R1Q9UHQ9 305 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 POLR1DQ9Y2S0 133 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 CAB39Q9Y376 341 aaPredicted RBP12.88□□□□□ -0.35
DDX56-208ENST00000467318 V9GYH0 126 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 ADGRG4Q8IZF6 3080 aa12.88□□□□□ -0.35
DDX56-208ENST00000467318 FABP12A6NFH5 140 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 GRNP28799 593 aaKnown RBP12.87□□□□□ -0.35
DDX56-208ENST00000467318 ARR3P36575 388 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
DDX56-208ENST00000467318 TRAM1Q15629 374 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 TAB1Q15750 504 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 GSG1Q2KHT4 349 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 AGAP6Q5VW22 663 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 LYPD4Q6UWN0 246 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 FAM131AQ6UXB0 335 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 SLC16A9Q7RTY1 509 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 FAM169BQ8N8A8 192 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 WDR31Q8NA23 367 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 ZNF485Q8NCK3 441 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 GJC3Q8NFK1 279 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 IL17RDQ8NFM7 739 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 OR2AJ1Q8NGZ0 328 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 OR52N5Q8NH56 324 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 FBXO17Q96EF6 278 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 TRMT61AQ96FX7 289 aaKnown RBP12.87□□□□□ -0.35
DDX56-208ENST00000467318 DIRAS2Q96HU8 199 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 MNTQ99583 582 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 NPDC1Q9NQX5 325 aaPredicted RBP12.87□□□□□ -0.35
DDX56-208ENST00000467318 B3GNT2Q9NY97 397 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 ZNF224Q9NZL3 707 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 ASH2LQ9UBL3 628 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 PLEKHB1Q9UF11 243 aaPredicted RBP12.87□□□□□ -0.35
DDX56-208ENST00000467318 TIMM10BQ9Y5J6 103 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 SLC25A15Q9Y619 301 aa12.87□□□□□ -0.35
DDX56-208ENST00000467318 TUBAL3A6NHL2 446 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 HLA-HP01893 362 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 SBK2P0C263 348 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 CD79AP11912 226 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 SPNP16150 400 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 RAB1AP62820 205 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 RPS25P62851 125 aaKnown RBP12.86□□□□□ -0.35
DDX56-208ENST00000467318 SCRN3Q0VDG4 424 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 ASAH1Q13510 395 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 PPA1Q15181 289 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 OR2G6Q5TZ20 316 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 TMEM53Q6P2H8 277 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 DPY19L4Q7Z388 723 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.86□□□□□ -0.35
DDX56-208ENST00000467318 ZNF454Q8N9F8 522 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 OR51G2Q8NGK0 314 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 OR6N2Q8NGY6 317 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 ACOT12Q8WYK0 555 aa12.86□□□□□ -0.35
DDX56-208ENST00000467318 SLC22A4Q9H015 551 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms