RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 ADA2Q9NZK5 511 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 SLC17A7Q9P2U7 560 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 SAR1BQ9Y6B6 198 aa2.71□□□□□ -1.98
VPS13A-209ENST00000467124 MN1Q10571 1320 aaPredicted RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 IGLV11-55A0A075B6I3 123 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 IGHV3-74A0A0B4J1X5 117 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 PINLYPA6NC86 204 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 XRCC2O43543 280 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 ANGPTL7O43827 346 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 ENTPD5O75356 428 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 PTTG1O95997 202 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 HLA-DPB1P04440 258 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 RETP07949 1114 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 TPM1P09493 284 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 ZNF823P16415 610 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 KIR3DL2P43630 455 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 RPS9P46781 194 aaKnown RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 HCAR3P49019 387 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 UBE2NP61088 152 aaKnown RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 RAP1AP62834 184 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 HNRNPA1L2Q32P51 320 aaKnown RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 THEM4Q5T1C6 240 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 IGFL2Q6UWQ7 119 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 FAM92BQ6ZTR7 304 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 UNC93AQ86WB7 457 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 COX18Q8N8Q8 333 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 ASCC1Q8N9N2 400 aaKnown RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 OR11H7Q8NGC8 314 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 OR6Q1Q8NGQ2 317 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 TFGQ92734 400 aaPredicted RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 TM4SF18Q96CE8 201 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 SGTBQ96EQ0 304 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 CHAC1Q9BUX1 264 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 SLIRPQ9GZT3 109 aaKnown RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 RBAKQ9NYW8 714 aaPredicted RBP2.7□□□□□ -1.98
VPS13A-209ENST00000467124 IFNKQ9P0W0 207 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 ZNF222Q9UK12 451 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 FLVCR2Q9UPI3 526 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 PIKFYVEQ9Y2I7 2098 aa2.7□□□□□ -1.98
VPS13A-209ENST00000467124 ADGRA3Q8IWK6 1321 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 PCDH11XQ9BZA7 1347 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 A0A096LNJ9 63 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 A0A1B0GUH1 482 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 SLC22A20A6NK97 555 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 FOXH1O75593 365 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 HPRT1P00492 218 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 WARSP23381 471 aaKnown RBP2.69□□□□□ -1.98
VPS13A-209ENST00000467124 GGT2P36268 569 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 FABP6P51161 128 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 ATP5J2P56134 94 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 CLDN18P56856 261 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 HERVK_113P61574 105 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 CYP24A1Q07973 514 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 TFDP3Q5H9I0 405 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 H3F3CQ6NXT2 135 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 PRMT9Q6P2P2 845 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 ASCL4Q6XD76 172 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 PCP2Q8IVA1 136 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 C12orf56Q8IXR9 622 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 Q8N7P7 452 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 C11orf72Q8NBR9 251 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 CACNG8Q8WXS5 425 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 NTAN1Q96AB6 310 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 LRRC39Q96DD0 335 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 DEFB129Q9H1M3 183 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 IFI27L2Q9H2X8 130 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 PATZ1Q9HBE1 687 aaKnown RBP2.69□□□□□ -1.98
VPS13A-209ENST00000467124 ISYNA1Q9NPH2 558 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 FBXO8Q9NRD0 319 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 FAM49BQ9NUQ9 324 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 NYAP2Q9P242 653 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 CTSFQ9UBX1 484 aa2.69□□□□□ -1.98
VPS13A-209ENST00000467124 BZW2Q9Y6E2 419 aaKnown RBP2.69□□□□□ -1.98
VPS13A-209ENST00000467124 IGHV5-51A0A0C4DH38 117 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 IGHV3-66A0A0C4DH42 116 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 IGKV1-8A0A0C4DH67 115 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 A0A1W2PP18 115 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 OR6C74A6NCV1 312 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 ANKRD63C9JTQ0 380 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 ANKRD65E5RJM6 399 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 NDUFS8O00217 210 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 CDC40O60508 579 aaKnown RBP eCLIP2.68□□□□□ -1.98
VPS13A-209ENST00000467124 S100A9P06702 114 aaKnown RBP2.68□□□□□ -1.98
VPS13A-209ENST00000467124 PSMC3P17980 439 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 OMGP23515 440 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 BMI1P35226 326 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 SSTR5P35346 364 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 LONP1P36776 959 aaKnown RBP2.68□□□□□ -1.98
VPS13A-209ENST00000467124 ETV1P50549 477 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 QPRTQ15274 297 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 NKAIN1Q4KMZ8 207 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 ORMDL2Q53FV1 153 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 SLC25A25Q6KCM7 469 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 TMEM205Q6UW68 189 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 TIFABQ6ZNK6 161 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 LINC00336Q6ZUF6 198 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 NKAIN4Q8IVV8 208 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 RIMKLAQ8IXN7 391 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 ARHGAP18Q8N392 663 aa2.68□□□□□ -1.98
VPS13A-209ENST00000467124 WDR31Q8NA23 367 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms