RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 FRMD1Q8N878 549 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 GATSQ8NAP1 163 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 OR52N5Q8NH56 324 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 PHOSPHO1Q8TCT1 267 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 SULT4A1Q9BR01 284 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 ABHD6Q9BV23 337 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 SLC5A7Q9GZV3 580 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 OR10A5Q9H207 317 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 FN3KRPQ9HA64 309 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 PARP11Q9NR21 331 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 VSX1Q9NZR4 365 aaPredicted RBP17.67■□□□□ 0.42
SDF4-205ENST00000465727 LHX6Q9UPM6 363 aa17.67■□□□□ 0.42
SDF4-205ENST00000465727 IGLV1-36A0A0B4J1U3 117 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 LOC107986453A0A1B0GWG9 222 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 SRSF10O75494 262 aaKnown RBP17.66■□□□□ 0.42
SDF4-205ENST00000465727 BPNT1O95861 308 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 PVRP15151 417 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 F2RL1P55085 397 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 BIKQ13323 160 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 ELAVL1Q15717 326 aaKnown RBP17.66■□□□□ 0.42
SDF4-205ENST00000465727 RBMS3Q6XE24 437 aaKnown RBP17.66■□□□□ 0.42
SDF4-205ENST00000465727 CHST4Q8NCG5 386 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 TERB2Q8NHR7 220 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 MARCH1Q8TCQ1 289 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 NKD1Q969G9 470 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 ASB16Q96NS5 453 aa17.66■□□□□ 0.42
SDF4-205ENST00000465727 FAM221BA6H8Z2 402 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 MSGN1A6NI15 193 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 SCDO00767 359 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 CSTBP04080 98 aaKnown RBP17.65■□□□□ 0.42
SDF4-205ENST00000465727 RNH1P13489 461 aaKnown RBP17.65■□□□□ 0.42
SDF4-205ENST00000465727 SULT1A2P50226 295 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 RPL27P61353 136 aaKnown RBP17.65■□□□□ 0.42
SDF4-205ENST00000465727 ACTBL2Q562R1 376 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 BTNL8Q6UX41 500 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 ARRDC1Q8N5I2 433 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 OR9A4Q8NGU2 314 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 ADAM19Q9H013 955 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 PDE7BQ9NP56 450 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 PRODH2Q9UF12 536 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 CACFD1Q9UGQ2 172 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 FAM157AC9JC47 383 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 TGFBR3LH3BV60 316 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 OIP5O43482 229 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 GATCO43716 136 aaKnown RBP17.65■□□□□ 0.42
SDF4-205ENST00000465727 MED6O75586 246 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 SFT2D2O95562 160 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 APBB3O95704 486 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 BGLAPP02818 100 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 HSD11B1P28845 292 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 LPAR6P43657 344 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 CBLN3Q6UW01 205 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 TMPPEQ6ZT21 453 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 ZNF563Q8TA94 476 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 ZNF519Q8TB69 540 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 FAM131CQ96AQ9 280 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 KIRREL1Q96J84 757 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 TAAR9Q96RI9 348 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 TAF9BQ9HBM6 251 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 FBLN5Q9UBX5 448 aa17.65■□□□□ 0.42
SDF4-205ENST00000465727 SLC16A7O60669 478 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 CPT2P23786 658 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 GDI1P31150 447 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 SLC6A8P48029 635 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 CSNK1EP49674 416 aaKnown RBP17.64■□□□□ 0.41
SDF4-205ENST00000465727 RBM39Q14498 530 aaKnown RBP17.64■□□□□ 0.41
SDF4-205ENST00000465727 C5orf46Q6UWT4 87 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 MED25Q71SY5 747 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 NECAB3Q96P71 396 aaPredicted RBP17.64■□□□□ 0.41
SDF4-205ENST00000465727 SCGB3A2Q96PL1 93 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 CLCC1Q96S66 551 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 ELF4Q99607 663 aaPredicted RBP17.64■□□□□ 0.41
SDF4-205ENST00000465727 CNTD2Q9H8S5 307 aa17.64■□□□□ 0.41
SDF4-205ENST00000465727 KIAA0100Q14667 2235 aaKnown RBP17.64■□□□□ 0.41
SDF4-205ENST00000465727 TRAV36DV7A0A075B6V5 113 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 SLC31A1O15431 190 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 MT-ATP6P00846 226 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 ADH6P28332 368 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 PPT1P50897 306 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 NFATC4Q14934 902 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 SGCBQ16585 318 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 SLC22A6Q4U2R8 563 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 VAX1Q5SQQ9 334 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 DHRS11Q6UWP2 260 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 SLC29A4Q7RTT9 530 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 ZNF615Q8N8J6 731 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 OR4K15Q8NH41 348 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 CCL4L1Q8NHW4 92 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 ADAMTS18Q8TE60 1221 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 DEFB118Q96PH6 123 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 OR2S2Q9NQN1 319 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 STARD5Q9NSY2 213 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 OR5AC2Q9NZP5 309 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 GPR132Q9UNW8 380 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 EMC9Q9Y3B6 208 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 FLVCR1Q9Y5Y0 555 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 CLDN4O14493 209 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 SSX5O60225 188 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 LRP3O75074 770 aa17.63■□□□□ 0.41
SDF4-205ENST00000465727 TIMP1P01033 207 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms