RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 PRRC1Q96M27 445 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 SAMD10Q9BYL1 202 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 ACTR3CQ9C0K3 210 aaPredicted RBP2.05□□□□□ -2.08
SMC4-205ENST00000465563 PTTG3PQ9NZH4 202 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 DUX4Q9UBX2 424 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 CARHSP1Q9Y2V2 147 aaKnown RBP2.05□□□□□ -2.08
SMC4-205ENST00000465563 PTPRTO14522 1441 aa2.05□□□□□ -2.08
SMC4-205ENST00000465563 DNASE2O00115 360 aaPredicted RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 YIF1AO95070 293 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 OR8G3PP0DMU2 310 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 GGT1P19440 569 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 WARSP23381 471 aaKnown RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 UQCRFS1P47985 274 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 EIF3EP60228 445 aaKnown RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 CDH17Q12864 832 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 NID2Q14112 1375 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 C1orf185Q5T7R7 199 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 METTL21CQ5VZV1 264 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 FBXW9Q5XUX1 488 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 TTC23LQ6PF05 361 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 SPESP1Q6UW49 350 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 PHLPP2Q6ZVD8 1323 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 MBOAT2Q6ZWT7 520 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 SSX9Q7RTT3 188 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 RIMKLAQ8IXN7 391 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 OR52E2Q8NGJ4 325 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 PIFOQ8TCI5 191 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 ZCCHC13Q8WW36 166 aaKnown RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 ESR2Q92731 530 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 TMEM230Q96A57 120 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 NTAN1Q96AB6 310 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 EEF1AKMT3Q96AZ1 226 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 TM4SF18Q96CE8 201 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 MICU1Q9BPX6 476 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 MTG1Q9BT17 334 aaPredicted RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 UCK2Q9BZX2 261 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 TMEM38AQ9H6F2 299 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 HMG20AQ9NP66 347 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 SAMSN1Q9NSI8 373 aaKnown RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 C20orf96Q9NUD7 363 aaPredicted RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 ZNRD1Q9P1U0 126 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 TBC1D24Q9ULP9 559 aa2.04□□□□□ -2.08
SMC4-205ENST00000465563 RCL1Q9Y2P8 373 aaKnown RBP2.04□□□□□ -2.08
SMC4-205ENST00000465563 AHDC1Q5TGY3 1603 aaPredicted RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 PALLDQ8WX93 1383 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 TRAV25A0A0B4J276 109 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 IGKV1-8A0A0C4DH67 115 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 TMEM223A0PJW6 202 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 H7C417 338 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 RRP8O43159 456 aaKnown RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 DNAJB6O75190 326 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 SLC25A14O95258 325 aaPredicted RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 EIF4EP06730 217 aaKnown RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 TPM2P07951 284 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 ANXA8P13928 327 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 RAB3AP20336 220 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 U2AF2P26368 475 aaKnown RBP eCLIP2.03□□□□□ -2.083e-6■■■■■ 27.4
SMC4-205ENST00000465563 SSTR5P35346 364 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 NBL1P41271 181 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 RPS5P46782 204 aaKnown RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 ATP5OP48047 213 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 IRF8Q02556 426 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 ORMDL2Q53FV1 153 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 ANXA8L1Q5VT79 327 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 CLEC2AQ6UVW9 174 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 CDKL3Q8IVW4 592 aaPredicted RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 C8orf31Q8N9H6 132 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 TTC29Q8NA56 475 aaPredicted RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 OR6N1Q8NGY5 312 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 OR52E5Q8NH55 327 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 NARS2Q96I59 477 aaKnown RBP2.03□□□□□ -2.08
SMC4-205ENST00000465563 ZYG11BQ9C0D3 744 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 ELOVL6Q9H5J4 265 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 LYRM4Q9HD34 91 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 ACP6Q9NPH0 428 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 FAM49BQ9NUQ9 324 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 CLN6Q9NWW5 311 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 MTFP1Q9UDX5 166 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 TMEM14AQ9Y6G1 99 aa2.03□□□□□ -2.08
SMC4-205ENST00000465563 FHOD3Q2V2M9 1422 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 A0A1W2PP18 115 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 TEX46H3BTG2 121 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 L7N2F9 121 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 WRBO00258 174 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 BPY2O14599 106 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 SLC9A3R1O14745 358 aaPredicted RBP2.02□□□□□ -2.09
SMC4-205ENST00000465563 CCNB2O95067 398 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 HBE1P02100 147 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 ASGR1P07306 291 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 TACSTD2P09758 323 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 RAB4AP20338 218 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 GSTM3P21266 225 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 TNFSF9P41273 254 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 KIR3DL2P43630 455 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 SYNJ2BPP57105 145 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 UBE2NP61088 152 aaKnown RBP2.02□□□□□ -2.09
SMC4-205ENST00000465563 PPP1CBP62140 327 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 IL18Q14116 193 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 PSMD5Q16401 504 aa2.02□□□□□ -2.09
SMC4-205ENST00000465563 ZNF684Q5T5D7 378 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms