RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TUBA1AQ71U36 451 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 SLC35F2Q8IXU6 374 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 KBTBD8Q8NFY9 601 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 OR4F15Q8NGB8 312 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 OR1F12Q8NHA8 337 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 FBLIM1Q8WUP2 373 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 THEM6Q8WUY1 208 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 ELOVL3Q9HB03 270 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 TUBG2Q9NRH3 451 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 PLCXD1Q9NUJ7 323 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 MRPS18AQ9NVS2 196 aaKnown RBP15.09■□□□□ 0.01
CPSF4-209ENST00000465132 CHCHD3Q9NX63 227 aaKnown RBP15.09■□□□□ 0.01
CPSF4-209ENST00000465132 CNOT2Q9NZN8 540 aaKnown RBP15.09■□□□□ 0.01
CPSF4-209ENST00000465132 TPRKBQ9Y3C4 175 aa15.09■□□□□ 0.01
CPSF4-209ENST00000465132 HEATR1Q9H583 2144 aaKnown RBP15.08■□□□□ 0.01
CPSF4-209ENST00000465132 J3QW42 95 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 GPANK1O95872 356 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 IGHV4-39P01824 125 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 SCG5P05408 212 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 CD40P25942 277 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 HSD11B1P28845 292 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 TPTEP56180 551 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 RPS23P62266 143 aaKnown RBP15.08■□□□□ 0
CPSF4-209ENST00000465132 ZNF91Q05481 1191 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 EGR3Q06889 387 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 RAB39AQ14964 217 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 ZNF774Q6NX45 483 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 VASH1Q7L8A9 365 aaPredicted RBP15.08■□□□□ 0
CPSF4-209ENST00000465132 BCDIN3DQ7Z5W3 292 aaKnown RBP15.08■□□□□ 0
CPSF4-209ENST00000465132 KCTD20Q7Z5Y7 419 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 LINC00346Q8IVM7 164 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 CNIH3Q8TBE1 160 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 HAVCR2Q8TDQ0 301 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 ZNRF4Q8WWF5 429 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 HTRA1Q92743 480 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 SLAMF6Q96DU3 332 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 CNBD2Q96M20 576 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 C1QTNF6Q9BXI9 259 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 WNT5BQ9H1J7 359 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 ADGRL4Q9HBW9 690 aa15.08■□□□□ 0
CPSF4-209ENST00000465132 EXOGQ9Y2C4 368 aaKnown RBP15.08■□□□□ 0
CPSF4-209ENST00000465132 ANK3Q12955 4377 aaKnown RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 IGHV1-18A0A0C4DH31 117 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 DAPL1A0PJW8 107 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 RER1O15258 196 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 SELENOFO60613 162 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 FAM20BO75063 409 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 WBP4O75554 376 aaKnown RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 MRPL3P09001 348 aaKnown RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 TACSTD2P09758 323 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 H2BFMP0C1H6 154 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 CCDC159P0C7I6 412 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 CECR9P0C854 216 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 PATE4P0C8F1 98 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 PIPP12273 146 aaPredicted RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 MYL12AP19105 171 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 ALOX5APP20292 161 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 DCKP27707 260 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 RAD52P43351 418 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 ACTA2P62736 377 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 ACTG2P63267 376 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 NAAAQ02083 359 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 C6orf141Q5SZD1 244 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 ZNF544Q6NX49 715 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 PLEKHG7Q6ZR37 379 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 DNM1P46Q6ZS02 220 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 KRT77Q7Z794 578 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 ACBD7Q8N6N7 88 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 OR10H4Q8NGA5 316 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 RNF133Q8WVZ7 376 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 APH1BQ8WW43 257 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 MYDGFQ969H8 173 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 COPS4Q9BT78 406 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 TRAF4Q9BUZ4 470 aaPredicted RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 ABHD6Q9BV23 337 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 YTHDF1Q9BYJ9 559 aaKnown RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 CENPMQ9NSP4 180 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 DDX28Q9NUL7 540 aaKnown RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 POU2F3Q9UKI9 436 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 SONP18583 2426 aaKnown RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 COL6A5A8TX70 2615 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 ATRQ13535 2644 aa15.07■□□□□ 0
CPSF4-209ENST00000465132 FBN1P35555 2871 aaKnown RBP15.07■□□□□ 0
CPSF4-209ENST00000465132 C5orf49A4QMS7 147 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 ABCD4O14678 606 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 SYNGR3O43761 229 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 CD8AP01732 235 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 KRT8P05787 483 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 CCDC92Q53HC0 331 aaPredicted RBP15.06■□□□□ 0
CPSF4-209ENST00000465132 RBM48Q5RL73 367 aaKnown RBP15.06■□□□□ 0
CPSF4-209ENST00000465132 TMEM154Q6P9G4 183 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 CORO6Q6QEF8 472 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 SLC22A25Q6T423 547 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 FAM220AQ7Z4H9 259 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 PIAS4Q8N2W9 510 aaPredicted RBP15.06■□□□□ 0
CPSF4-209ENST00000465132 BPIFB6Q8NFQ5 453 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 OR5L1Q8NGL2 311 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 AKR7LQ8NHP1 331 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 FGFBP3Q8TAT2 258 aa15.06■□□□□ 0
CPSF4-209ENST00000465132 ST7LQ8TDW4 575 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms