RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 HLA-AP01891 365 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TK1P04183 234 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 IFNW1P05000 195 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CSF1P09603 554 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CHATP28329 748 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SLC6A11P48066 632 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CDKN1CP49918 316 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 P2RX1P51575 399 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RAB1AP62820 205 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 BDH1Q02338 343 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF763Q0D2J5 394 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 DUSP8Q13202 625 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CNN3Q15417 329 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FBLN7Q53RD9 439 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 UBE2NLQ5JXB2 153 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ARMC12Q5T9G4 340 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 UNQ5815/PRO19632Q6UWF5 114 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 LCTLQ6UWM7 567 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TOMM20LQ6UXN7 152 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FRRS1Q6ZNA5 592 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMCO2Q7Z6W1 182 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 C1orf210Q8IVY1 113 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ARHGAP12Q8IWW6 846 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GBGT1Q8N5D6 347 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SUMF2Q8NBJ7 301 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SLC30A7Q8NEW0 376 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 BBS1Q8NFJ9 593 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR10H4Q8NGA5 316 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR2D3Q8NGH3 330 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR11L1Q8NGX0 322 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR2L2Q8NH16 312 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR4K15Q8NH41 348 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RPUSD4Q96CM3 377 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SMIM12Q96EX1 92 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SMIM8Q96KF7 97 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 LYSMD1Q96S90 227 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NUDT9Q9BW91 350 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR8D2Q9GZM6 311 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM39BQ9GZU3 492 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SLC25A18Q9H1K4 315 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PCED1AQ9H1Q7 454 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CXCL16Q9H2A7 254 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TMEM38AQ9H6F2 299 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 EGLN3Q9H6Z9 239 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TXNRD2Q9NNW7 524 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ASB6Q9NWX5 421 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SOHLH2Q9NX45 425 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 KLHL28Q9NXS3 571 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 FKBP11Q9NYL4 201 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RAB22AQ9UL26 194 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RAXQ9Y2V3 346 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CLDN16Q9Y5I7 305 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MRPS18BQ9Y676 258 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ARL5CA6NH57 179 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 EPOPA6NHQ4 379 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 E5RGE8 158 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 INSIG1O15503 277 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TNFSF12O43508 249 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GPR32O75388 356 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MTX2O75431 263 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GCM2O75603 506 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CNMDO75829 334 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PPP1R3DO95685 299 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CYC1P08574 325 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MELTFP08582 738 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MRPL3P09001 348 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NBEAP1P0C6P0 100 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 KLK2P20151 261 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PTNP21246 168 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GLRA1P23415 457 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ARL2P36404 184 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 XCR1P46094 333 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PRPS1P60891 318 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 TIAL1Q01085 375 aaKnown RBP eCLIP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ID3Q02535 119 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 HYAL1Q12794 435 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SCARB2Q14108 478 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PAFAH1B3Q15102 231 aaKnown RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 RGNQ15493 299 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 HAGHQ16775 308 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SMIM21Q3B7S5 101 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ACSM3Q53FZ2 586 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SOHLH1Q5JUK2 328 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 PRR27Q6MZM9 219 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ZNF322Q6U7Q0 402 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 GKN2Q86XP6 184 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SYT12Q8IV01 421 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CCDC117Q8IWD4 279 aaPredicted RBP3.24□□□□□ -1.89
COL8A1-205ENST00000463753 C1orf87Q8N0U7 546 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 NXPE1Q8N323 547 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 STPG4Q8N801 248 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 EXD3Q8N9H8 876 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 MFSD9Q8NBP5 474 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR1P1Q8NH06 330 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR5W2Q8NH69 310 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR5AK3PQ8NH89 298 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 OR14L1PQ8NHC6 308 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 SYNPRQ8TBG9 265 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 CD200R1Q8TD46 325 aa3.24□□□□□ -1.89
COL8A1-205ENST00000463753 ADAMTS18Q8TE60 1221 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms