RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 GRK5P34947 590 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 BLVRAP53004 296 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 CDH15P55291 814 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 TNFAIP6P98066 277 aaPredicted RBP13.79□□□□□ -0.2
COL1A1-202ENST00000463440 SLC3A1Q07837 685 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 FBXW12Q6X9E4 464 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 PAPD5Q8NDF8 572 aaKnown RBP13.79□□□□□ -0.2
COL1A1-202ENST00000463440 RAB1CQ92928 201 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 TIMD4Q96H15 378 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 C1orf159Q96HA4 380 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 NMNAT2Q9BZQ4 307 aa13.79□□□□□ -0.2
COL1A1-202ENST00000463440 B4DSR2 109 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 GYPBP06028 91 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 ACSM4P0C7M7 580 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 FAM157CP0CG43 387 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 ANXA8P13928 327 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 IGFBP5P24593 272 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 POU1F1P28069 291 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 ENTPD1P49961 510 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 ERFP50548 548 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 TPTEP56180 551 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 MVKQ03426 396 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 HLXQ14774 488 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-202ENST00000463440 RSPO1Q2MKA7 263 aaPredicted RBP13.78□□□□□ -0.2
COL1A1-202ENST00000463440 KRTAP27-1Q3LI81 207 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 SLC27A4Q6P1M0 643 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 COLCA1Q6ZS62 124 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 OR2Z1Q8NG97 314 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 OR6K6Q8NGW6 343 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 ZNRF4Q8WWF5 429 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 CCL17Q92583 94 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 SPTSSAQ969W0 71 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 MAP6Q96JE9 813 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 HCAR1Q9BXC0 346 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 C1QTNF5Q9BXJ0 243 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 PNRC2Q9NPJ4 139 aaKnown RBP13.78□□□□□ -0.2
COL1A1-202ENST00000463440 CACNG2Q9Y698 323 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 COMMD3-BMI1R4GMX3 469 aa13.78□□□□□ -0.2
COL1A1-202ENST00000463440 SURF4O15260 269 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 DEAF1O75398 565 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-202ENST00000463440 LCATP04180 440 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 SPARCP09486 303 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 OSMP13725 252 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 SELEP16581 610 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 TNFRSF1AP19438 455 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 PAICSP22234 425 aaKnown RBP13.77□□□□□ -0.21
COL1A1-202ENST00000463440 RPS27P42677 84 aaKnown RBP13.77□□□□□ -0.21
COL1A1-202ENST00000463440 MALLQ13021 153 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 FAM120AOSQ5T036 256 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 AVPI1Q5T686 147 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 OR2T2Q6IF00 324 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 LYPD4Q6UWN0 246 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 Q6ZR03 302 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 DCXRQ7Z4W1 244 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 PEG10Q86TG7 708 aaKnown RBP13.77□□□□□ -0.21
COL1A1-202ENST00000463440 OR5AS1Q8N127 324 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 ATG16L2Q8NAA4 619 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 ZNF511Q8NB15 262 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 SLCO4A1Q96BD0 722 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 OTULINQ96BN8 352 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 ZNF582Q96NG8 517 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-202ENST00000463440 MMADHCQ9H3L0 296 aaPredicted RBP13.77□□□□□ -0.21
COL1A1-202ENST00000463440 WDR76Q9H967 626 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 TREM2Q9NZC2 230 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 WIPI2Q9Y4P8 454 aa13.77□□□□□ -0.21
COL1A1-202ENST00000463440 KIAA1324LA8MWY0 1029 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-202ENST00000463440 M0R135 149 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 ZNF593O00488 134 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-202ENST00000463440 WNT9BO14905 357 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 HMGN1P05114 100 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 CLUP10909 449 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 PCMT1P22061 227 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 PRKACGP22612 351 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 SLC6A9P48067 706 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 DVL1P1P54792 670 aaPredicted RBP13.76□□□□□ -0.21
COL1A1-202ENST00000463440 GINS1Q14691 196 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 TEX30Q5JUR7 227 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 SHQ1Q6PI26 577 aaKnown RBP13.76□□□□□ -0.21
COL1A1-202ENST00000463440 HS3ST5Q8IZT8 346 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 OR8G5Q8NG78 346 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 OR10S1Q8NGN2 331 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 OR13G1Q8NGZ3 307 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 NRBF2Q96F24 287 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 ZNF799Q96GE5 643 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 TEX12Q9BXU0 123 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 DDX28Q9NUL7 540 aaKnown RBP13.76□□□□□ -0.21
COL1A1-202ENST00000463440 IL19Q9UHD0 177 aa13.76□□□□□ -0.21
COL1A1-202ENST00000463440 ANK3Q12955 4377 aaKnown RBP13.76□□□□□ -0.21
COL1A1-202ENST00000463440 FAM183AA6NL82 134 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 IQCF6A8MYZ5 107 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 TIPRLO75663 272 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 ANPEPP15144 967 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 LMO4P61968 165 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 TAF13Q15543 124 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 PCK2Q16822 640 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 CR1LQ2VPA4 569 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 ACSM5Q6NUN0 579 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 NAA40Q86UY6 237 aa13.75□□□□□ -0.21
COL1A1-202ENST00000463440 GLCCI1Q86VQ1 547 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms