RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TMEM178BH3BS89 294 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 IFNL4K9M1U5 179 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 DOK2O60496 412 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 KRT36O76013 467 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 GADD45GO95257 159 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 SCG5P05408 212 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 RRM2P31350 389 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 RBMXP38159 391 aaKnown RBP16.61■□□□□ 0.25
VARS-221ENST00000463184 HTR5AP47898 357 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 PRKCDQ05655 676 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 SLC9A3R2Q15599 337 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 FGD3Q5JSP0 725 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 TBPL2Q6SJ96 375 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 C9orf139Q6ZV77 190 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 NRMQ8IXM6 262 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 OR51A7Q8NH64 312 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 OR2V2Q96R30 315 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 CHID1Q9BWS9 393 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 SLITRK2Q9H156 845 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 STARD10Q9Y365 291 aa16.61■□□□□ 0.25
VARS-221ENST00000463184 TRAV27A0A087WT01 109 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 CEACAM18A8MTB9 384 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 SGCEO43556 437 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 WNT2P09544 360 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 CD80P33681 288 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 FHL1Q13642 323 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 PDLIM3Q53GG5 364 aaPredicted RBP16.6■□□□□ 0.25
VARS-221ENST00000463184 LEG1Q6P5S2 330 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 BTNL3Q6UXE8 466 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 LRRN1Q6UXK5 716 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 OAFQ86UD1 273 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 OR52J3Q8NH60 311 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 RSRC1Q96IZ7 334 aaKnown RBP16.6■□□□□ 0.25
VARS-221ENST00000463184 FUZQ9BT04 418 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 SSBP3Q9BWW4 388 aaPredicted RBP16.6■□□□□ 0.25
VARS-221ENST00000463184 YY1AP1Q9H869 796 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 GCM1Q9NP62 436 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 EMC7Q9NPA0 242 aa16.6■□□□□ 0.25
VARS-221ENST00000463184 TRBV4-1A0A0J9YWV2 114 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 AHCYL1O43865 530 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 RAC2P15153 192 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 SLC9A3P48764 834 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 HMGA2P52926 109 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 SLC27A4Q6P1M0 643 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 VASH1Q7L8A9 365 aaPredicted RBP16.59■□□□□ 0.25
VARS-221ENST00000463184 PARP8Q8N3A8 854 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 PAPD5Q8NDF8 572 aaKnown RBP16.59■□□□□ 0.25
VARS-221ENST00000463184 KRCC1Q9NPI7 259 aaPredicted RBP16.59■□□□□ 0.25
VARS-221ENST00000463184 GRHPRQ9UBQ7 328 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 TMCC3Q9ULS5 477 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 TMEM5Q9Y2B1 443 aa16.59■□□□□ 0.25
VARS-221ENST00000463184 EFCAB9A8MZ26 197 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 H7C1C5 153 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 J3QW42 95 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 TNFRSF11BO00300 401 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 IGHV4-38-2P0DP08 117 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 MMP16P51512 607 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 LCN6P62502 163 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 DEFA6Q01524 100 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 PAX2Q02962 417 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 SEC23BQ15437 767 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 OR2T5Q6IEZ7 315 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 ATG16L2Q8NAA4 619 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 OR2T29Q8NH02 315 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 UPRTQ96BW1 309 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 RAB3IPQ96QF0 476 aaPredicted RBP16.58■□□□□ 0.24
VARS-221ENST00000463184 MIOXQ9UGB7 285 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 LYVE1Q9Y5Y7 322 aa16.58■□□□□ 0.24
VARS-221ENST00000463184 XKRYO14609 159 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 FKBP6O75344 327 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 PLATP00750 562 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 CST1P01037 141 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 RPS2P15880 293 aaKnown RBP16.57■□□□□ 0.24
VARS-221ENST00000463184 RPL4P36578 427 aaKnown RBP16.57■□□□□ 0.24
VARS-221ENST00000463184 ERFP50548 548 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 AQP6Q13520 282 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 GK3PQ14409 553 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 ZSCAN26Q16670 478 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 C1orf94Q6P1W5 598 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 C16orf87Q6PH81 154 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 TMPRSS11FQ6ZWK6 438 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 OR5L1Q8NGL2 311 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 OR13G1Q8NGZ3 307 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 RAB40AQ8WXH6 277 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 SLCO4A1Q96BD0 722 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 PLEKHA8Q96JA3 519 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 REEP1Q9H902 201 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 TMEM165Q9HC07 324 aa16.57■□□□□ 0.24
VARS-221ENST00000463184 IGHV3OR16-10A0A075B7F0 116 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 IGHV2-70DA0A0C4DH43 119 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 TEX13CA0A0J9YWL9 993 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 FSTL3O95633 263 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 GPANK1O95872 356 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 CD14P08571 375 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 IFNGR2P38484 337 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 RGS6P49758 472 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 LSM6P62312 80 aaKnown RBP16.56■□□□□ 0.24
VARS-221ENST00000463184 GNB2P62879 340 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 KLBQ86Z14 1044 aa16.56■□□□□ 0.24
VARS-221ENST00000463184 OR5AS1Q8N127 324 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms