RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 ZNF704Q6ZNC4 412 aaPredicted RBP9.29□□□□□ -0.92
RTF1-202ENST00000462276 MS4A15Q8N5U1 240 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 CPEB3Q8NE35 698 aaKnown RBP9.29□□□□□ -0.92
RTF1-202ENST00000462276 SLC30A7Q8NEW0 376 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 OR2G2Q8NGZ5 317 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 AKR7LQ8NHP1 331 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 HTRA1Q92743 480 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 THRSPQ92748 146 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 UFD1Q92890 307 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 ZNF799Q96GE5 643 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 POM121L2Q96KW2 1035 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 ZNF75AQ96N20 296 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 OR5M11Q96RB7 305 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 RGCCQ9H4X1 137 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 ISG20L2Q9H9L3 353 aaKnown RBP9.29□□□□□ -0.92
RTF1-202ENST00000462276 ACOXLQ9NUZ1 547 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 TBCCD1Q9NVR7 557 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 EIF3KQ9UBQ5 218 aaKnown RBP9.29□□□□□ -0.92
RTF1-202ENST00000462276 FREM1Q5H8C1 2179 aa9.29□□□□□ -0.92
RTF1-202ENST00000462276 TMEM212A6NML5 194 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 PRR32B1ATL7 298 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 F5H5K5 113 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 LOC110117498-PIK3R3F6TDL0 507 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 INMTO95050 263 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 LCKP06239 509 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 ACSM4P0C7M7 580 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 HSMCR30P0CW71 290 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 CPEP16870 476 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 GALP22466 123 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 CFL1P23528 166 aaKnown RBP9.28□□□□□ -0.92
RTF1-202ENST00000462276 PTAFRP25105 342 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 PSMB9P28065 219 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 GALK2Q01415 458 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 TFF3Q07654 80 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 ALKBH1Q13686 389 aaKnown RBP9.28□□□□□ -0.92
RTF1-202ENST00000462276 RAB39AQ14964 217 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 TSC22D1Q15714 1073 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 RSPO1Q2MKA7 263 aaPredicted RBP9.28□□□□□ -0.92
RTF1-202ENST00000462276 TIMM50Q3ZCQ8 353 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 ARMCX4Q5H9R4 360 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 DMKNQ6E0U4 476 aaPredicted RBP9.28□□□□□ -0.92
RTF1-202ENST00000462276 TMEM108Q6UXF1 575 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 COLCA1Q6ZS62 124 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 KLBQ86Z14 1044 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 RFLNBQ8N5W9 214 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 ZNF283Q8N7M2 679 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 OR5L1Q8NGL2 311 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 RPS4Y2Q8TD47 263 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 SMIM19Q96E16 107 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 DACH2Q96NX9 599 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 DOK1Q99704 481 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 MED18Q9BUE0 208 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 C1QTNF5Q9BXJ0 243 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 CDH20Q9HBT6 801 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 NDUFA13Q9P0J0 144 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 NUFIP1Q9UHK0 495 aaKnown RBP9.28□□□□□ -0.92
RTF1-202ENST00000462276 SPEF1Q9Y4P9 236 aa9.28□□□□□ -0.92
RTF1-202ENST00000462276 KLF2Q9Y5W3 355 aaPredicted RBP9.28□□□□□ -0.92
RTF1-202ENST00000462276 CACNA1CQ13936 2221 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 DIDO1Q9BTC0 2240 aaKnown RBP9.27□□□□□ -0.93
RTF1-202ENST00000462276 TRBV2A0A0J9YWF9 115 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 A0A0U1RQV5 110 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 C5orf49A4QMS7 147 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 ZNF503-AS2A6NEH8 195 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 TUBAL3A6NHL2 446 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 PSMD9O00233 223 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 CCRL2O00421 344 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 SRSF10O75494 262 aaKnown RBP9.27□□□□□ -0.93
RTF1-202ENST00000462276 RPP14O95059 124 aaKnown RBP9.27□□□□□ -0.93
RTF1-202ENST00000462276 SERPINA3P01011 423 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 ISG15P05161 165 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 UBCP0CG48 685 aaKnown RBP9.27□□□□□ -0.93
RTF1-202ENST00000462276 ZNF12P17014 697 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 CELP19835 753 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 APEX1P27695 318 aaKnown RBP9.27□□□□□ -0.93
RTF1-202ENST00000462276 CCKARP32238 428 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 CX3CR1P49238 355 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 IDH3GP51553 393 aaPredicted RBP9.27□□□□□ -0.93
RTF1-202ENST00000462276 PRKXP51817 358 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 CDK5R1Q15078 307 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 TMEM244Q5VVB8 128 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 SEZ6L2Q6UXD5 910 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 GDPGP1Q6ZNW5 385 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 SPATC1Q76KD6 591 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 GPR141Q7Z602 305 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 CATSPERDQ86XM0 798 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 ZNF584Q8IVC4 421 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 PHC2Q8IXK0 858 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 ELMOD2Q8IZ81 293 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 PHYHIPQ92561 330 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 APOBEC3DQ96AK3 386 aaPredicted RBP9.27□□□□□ -0.93
RTF1-202ENST00000462276 RADILQ96JH8 1075 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 C4orf45Q96LM5 186 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 COMMD4Q9H0A8 199 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 OR10A2Q9H208 303 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 OPA3Q9H6K4 179 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 BATF3Q9NR55 127 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 FAM206AQ9NX38 181 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 OR52A1Q9UKL2 312 aa9.27□□□□□ -0.93
RTF1-202ENST00000462276 DOPEY1Q5JWR5 2465 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms