RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZNF878C9JN71 531 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 H3BNX3 289 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 M0R135 149 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 SPRY3O43610 288 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 LY6G6DO95868 133 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 HPXP02790 462 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 LCATP04180 440 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 PSKH1P11801 424 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 NR4A2P43354 598 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 MAGEB1P43366 347 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 SLC6A9P48067 706 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 MALLQ13021 153 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 APOFQ13790 326 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 PCK2Q16822 640 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 KRTAP27-1Q3LI81 207 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 ZMAT1Q5H9K5 638 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 LCN1P1Q5VSP4 162 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 SLX4IPQ5VYV7 408 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 SPATC1Q76KD6 591 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 DPY19L4Q7Z388 723 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 ZNF786Q8N393 782 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 GTF3AQ92664 365 aaKnown RBP9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 RDH5Q92781 318 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 STMN2Q93045 179 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 HAVCR1Q96D42 359 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 ZNF799Q96GE5 643 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 CIB1Q99828 191 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 S100A14Q9HCY8 104 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 DDX28Q9NUL7 540 aaKnown RBP9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 NKIRAS2Q9NYR9 191 aa9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 H2AFY2Q9P0M6 372 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 TMEFF2Q9UIK5 374 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 MAP1AP78559 2803 aaPredicted RBP9.04□□□□□ -0.96
TRAPPC12-213ENST00000461577 LYNX1G3V0Z9 82 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 TLX2O43763 284 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 PRKYO43930 277 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 SELENOFO60613 162 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 BAG2O95816 211 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 HEXAP06865 529 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 LYNX1P0DP58 116 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 RAC2P15153 192 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 KITLGP21583 273 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 USF1P22415 310 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 TNFSF4P23510 183 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 HSD11B1P28845 292 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 NAA10P41227 235 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 SLC15A1P46059 708 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 MMP15P51511 669 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 PRKXP51817 358 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 GRB2P62993 217 aaKnown RBP9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 CCL8P80075 99 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 PPP2R2BQ00005 443 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 LOXL1Q08397 574 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 GGTLC2Q14390 218 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 RSPO1Q2MKA7 263 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 TMEM255AQ5JRV8 349 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 C12orf73Q69YU5 71 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 DRAM2Q6UX65 266 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 Q71RC1 249 aaPredicted RBP9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 NAA40Q86UY6 237 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 TIGD4Q8IY51 512 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 ZNF283Q8N7M2 679 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 TCEANCQ8N8B7 351 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 BBS1Q8NFJ9 593 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 OR10S1Q8NGN2 331 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 DIRC2Q96SL1 478 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 KCNJ15Q99712 375 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 C1QTNF5Q9BXJ0 243 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 GABARAPL3Q9BY60 117 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 EGLN1Q9GZT9 426 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 TOR3AQ9H497 397 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 MARCH7Q9H992 704 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 MSL2Q9HCI7 577 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 ZDHHC8Q9ULC8 765 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 N6AMT1Q9Y5N5 214 aa9.03□□□□□ -0.96
TRAPPC12-213ENST00000461577 FLNAP21333 2647 aaKnown RBP9.02□□□□□ -0.96
TRAPPC12-213ENST00000461577 ZSCAN5BA6NJL1 495 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 VWC2LB2RUY7 222 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 EI24O14681 340 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 NCR1O76036 304 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 IGHV1-46P01743 117 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 APOC1P02654 83 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 LYNP07948 512 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 H2BFMP0C1H6 154 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 SELEP16581 610 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 ACHEP22303 614 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 SLC2A5P22732 501 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 COL8A2P25067 703 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 EPHA2P29317 976 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 GPR6P46095 362 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 RAD23AP54725 363 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 MRPS11P82912 194 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 HLXQ14774 488 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 FAM209AQ5JX71 171 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 OR2T2Q6IF00 324 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 FBXW12Q6X9E4 464 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 MRPL21Q7Z2W9 205 aaKnown RBP9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.02□□□□□ -0.97
TRAPPC12-213ENST00000461577 OR5AS1Q8N127 324 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms