RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 SRMP19623 302 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 RAB4AP20338 218 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 RAB5AP20339 215 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 DTYMKP23919 212 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 GABRR2P28476 465 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 SSTR5P35346 364 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 NUP62P37198 522 aaPredicted RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 TALDO1P37837 337 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 NBL1P41271 181 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 RBM34P42696 430 aaKnown RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 ZNF121P58317 390 aaPredicted RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 RPS23P62266 143 aaKnown RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 LCN2P80188 198 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 PON2Q15165 354 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 IRF4Q15306 451 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 UBE2SQ16763 222 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 CHRFAM7AQ494W8 412 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 TCEAL5Q5H9L2 206 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 FAM78AQ5JUQ0 283 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 RWDD4Q6NW29 188 aaKnown RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 H3F3CQ6NXT2 135 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 FBXW12Q6X9E4 464 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 SNX20Q7Z614 316 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 ENTHD1Q8IYW4 607 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 PGAM4Q8N0Y7 254 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 COX18Q8N8Q8 333 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 NOXO1Q8NFA2 376 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 OR5W2Q8NH69 310 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 ITFG1Q8TB96 612 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 ZNF596Q8TC21 504 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 RAB1CQ92928 201 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 NAT6Q93015 286 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 TCEAL3Q969E4 200 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 ISOC2Q96AB3 205 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 MRGPRFQ96AM1 343 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 PDXPQ96GD0 296 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 COL21A1Q96P44 957 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 ZNF317Q96PQ6 595 aaPredicted RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 ZNF382Q96SR6 550 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 TIMM17AQ99595 171 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 GPR21Q99679 349 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 SLC17A9Q9BYT1 436 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 VCXQ9H320 206 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 SYNDIG1Q9H7V2 258 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 RBAKQ9NYW8 714 aaPredicted RBP2.08□□□□□ -2.08
VCL-203ENST00000461383 MTFP1Q9UDX5 166 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 FLVCR2Q9UPI3 526 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 HYOU1Q9Y4L1 999 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 GAKO14976 1311 aa2.08□□□□□ -2.08
VCL-203ENST00000461383 TRAV6A0A075B6T7 132 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 TRAV19A0A0A6YYK7 116 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 LOC100653049A0A140TA62 436 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 SLC19A2O60779 497 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 MED6O75586 246 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 KRT34O76011 436 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 SEMA3DO95025 777 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 ATF6P18850 670 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 TCN2P20062 427 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 USF1P22415 310 aaPredicted RBP2.07□□□□□ -2.08
VCL-203ENST00000461383 MYL9P24844 172 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 RPS9P46781 194 aaKnown RBP2.07□□□□□ -2.08
VCL-203ENST00000461383 SERPINB8P50452 374 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 UCNP55089 124 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 MECOMQ03112 1051 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 MADCAM1Q13477 382 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 TSC22D1Q15714 1073 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 RPEL1Q2QD12 228 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 DEFB116Q30KQ4 102 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 TPRG1LQ5T0D9 272 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 IGFL2Q6UWQ7 119 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 MRPL21Q7Z2W9 205 aaKnown RBP2.07□□□□□ -2.08
VCL-203ENST00000461383 FAM122BQ7Z309 247 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 CALHM1Q8IU99 346 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 KRTAP11-1Q8IUC1 163 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 CBLN2Q8IUK8 224 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 NKAIN4Q8IVV8 208 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 C12orf56Q8IXR9 622 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 NPWQ8N729 165 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 FAM86B1Q8N7N1 296 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 CYB561D1Q8N8Q1 229 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 Q8N9L7 120 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 OR10AD1Q8NGE0 317 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 PIFOQ8TCI5 191 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 RPEQ96AT9 228 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 ZNF707Q96C28 371 aaPredicted RBP2.07□□□□□ -2.08
VCL-203ENST00000461383 ZNF681Q96N22 645 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 HSD17B10Q99714 261 aaKnown RBP2.07□□□□□ -2.08
VCL-203ENST00000461383 UQCC2Q9BRT2 126 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 NDFIP1Q9BT67 221 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 CHAC1Q9BUX1 264 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 DEFB129Q9H1M3 183 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 SAV1Q9H4B6 383 aaPredicted RBP2.07□□□□□ -2.08
VCL-203ENST00000461383 HMG20AQ9NP66 347 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 ZDHHC4Q9NPG8 344 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 MED4Q9NPJ6 270 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 LHX9Q9NQ69 397 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 ZNF222Q9UK12 451 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 TBX21Q9UL17 535 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 ASTN1O14525 1302 aa2.07□□□□□ -2.08
VCL-203ENST00000461383 BRCA1P38398 1863 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms