RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 CDK1P06493 297 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 ZNF84P51523 738 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 FXYD6P3P58550 94 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 RUNX1T1Q06455 604 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 ZNF79Q15937 498 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 HIKESHIQ53FT3 197 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 CLLU1Q5K131 121 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 THEM4Q5T1C6 240 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 C10orf128Q5T292 105 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 METTL11BQ5VVY1 283 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 KLHL17Q6TDP4 642 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 CD300LDQ6UXZ3 194 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 THSD4Q6ZMP0 1018 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 TMPRSS11AQ6ZMR5 421 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 RASSF6Q6ZTQ3 369 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 ZNF367Q7RTV3 350 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 GDPD1Q8N9F7 314 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 WDR31Q8NA23 367 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 OR52L1Q8NGH7 329 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 OPALINQ96PE5 141 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 RHNO1Q9BSD3 238 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 COPS4Q9BT78 406 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 NELFAQ9H3P2 528 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 ESRP2Q9H6T0 727 aaKnown RBP9.69□□□□□ -0.86
APTX-209ENST00000460940 PTTG3PQ9NZH4 202 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 ADAM18Q9Y3Q7 739 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 MAST4O15021 2626 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 NAV2Q8IVL1 2488 aa9.69□□□□□ -0.86
APTX-209ENST00000460940 LOC100506127A0A0U1RQW1 187 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 ARPC3O15145 178 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 SIAH2O43255 324 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 MITFO75030 526 aaPredicted RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 GASTP01350 101 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 QDPRP09417 244 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 RGS6P49758 472 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 GBX2P52951 348 aaPredicted RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 PPP1R8Q12972 351 aaKnown RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 BAK1Q16611 211 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 LRFN4Q6PJG9 635 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 TEX261Q6UWH6 196 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 FAM169BQ8N8A8 192 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 SYT14Q8NB59 555 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 OR8H1Q8NGG4 311 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 OR52N5Q8NH56 324 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 NANOS1Q8WY41 292 aaKnown RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 MCHR2Q969V1 340 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 ZNF837Q96EG3 531 aaPredicted RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 PIK3IP1Q96FE7 263 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 Q96M85 177 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 RBP7Q96R05 134 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 FOXB1Q99853 325 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 BEX2Q9BXY8 128 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 C11orf54Q9H0W9 315 aaPredicted RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 OR51E2Q9H255 320 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 FKBP7Q9Y680 259 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 U3KQ87 197 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 FBN2P35556 2912 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 TEX13CA0A0J9YWL9 993 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 TSPAN4O14817 238 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 ZNF250P15622 560 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 PRKACGP22612 351 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 LOXP28300 417 aaPredicted RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 SMN1Q16637 294 aaKnown RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 C3orf36Q3SXR2 165 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 MESTQ5EB52 335 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 TMEM108Q6UXF1 575 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 ZNF813Q6ZN06 617 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 DPPA2Q7Z7J5 298 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 COMMD7Q86VX2 200 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 APH1BQ8WW43 257 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 GTPBP3Q969Y2 492 aaKnown RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 MARC2Q969Z3 335 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 PLPPR2Q96GM1 343 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 SAMD8Q96LT4 415 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 FEVQ99581 238 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 IFT27Q9BW83 186 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 TMEM38BQ9NVV0 291 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 PDP1Q9P0J1 537 aaPredicted RBP9.68□□□□□ -0.86
APTX-209ENST00000460940 IL20RAQ9UHF4 553 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 GLS2Q9UI32 602 aa9.68□□□□□ -0.86
APTX-209ENST00000460940 POLQO75417 2590 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 A0A096LPE4 126 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 IQCMA0A1B0GVH7 501 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 A0A1W2PPZ6 126 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 PRSS37A4D1T9 235 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 FARS2O95363 451 aaKnown RBP9.67□□□□□ -0.86
APTX-209ENST00000460940 PPP1R3DO95685 299 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 HLA-DQB1P01920 261 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 HMGN1P05114 100 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 ANXA8P13928 327 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 B4GALT1P15291 398 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 PTAFRP25105 342 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 DAPP51397 102 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 RRAS2P62070 204 aaPredicted RBP9.67□□□□□ -0.86
APTX-209ENST00000460940 SNRPD2P62316 118 aaKnown RBP9.67□□□□□ -0.86
APTX-209ENST00000460940 NCMAPQ5T1S8 102 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 GDPGP1Q6ZNW5 385 aa9.67□□□□□ -0.86
APTX-209ENST00000460940 ZNF680Q8NEM1 530 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms