RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 KRTAP27-1Q3LI81 207 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 OR51L1Q8NGJ5 315 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 OR9Q1Q8NGQ5 310 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 RAB1CQ92928 201 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 C1QTNF5Q9BXJ0 243 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 CADM1Q9BY67 442 aaKnown RBP19.52■□□□□ 0.72
PTPN4-208ENST00000460289 NMNAT2Q9BZQ4 307 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 ZNF556Q9HAH1 456 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 CMC2Q9NRP2 79 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 PTTG3PQ9NZH4 202 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 DNAJB9Q9UBS3 223 aa19.52■□□□□ 0.72
PTPN4-208ENST00000460289 MALRD1Q5VYJ5 2156 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 TVP23AA6NH52 213 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 FKBP6O75344 327 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 ZNF3P17036 446 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 TNFRSF1AP19438 455 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 TPTEP56180 551 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 MVKQ03426 396 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 HLXQ14774 488 aaPredicted RBP19.51■□□□□ 0.71
PTPN4-208ENST00000460289 FAM120AOSQ5T036 256 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 COLCA1Q6ZS62 124 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 TMEM179BQ7Z7N9 219 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 PAPD5Q8NDF8 572 aaKnown RBP19.51■□□□□ 0.71
PTPN4-208ENST00000460289 OR2Z1Q8NG97 314 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 ZNRF4Q8WWF5 429 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 PNRC2Q9NPJ4 139 aaKnown RBP19.51■□□□□ 0.71
PTPN4-208ENST00000460289 TREM2Q9NZC2 230 aa19.51■□□□□ 0.71
PTPN4-208ENST00000460289 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.51■□□□□ 0.712e-6■■■■□ 26.6
PTPN4-208ENST00000460289 WNT9BO14905 357 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 SURF4O15260 269 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 ACSM4P0C7M7 580 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 ANXA8P13928 327 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 SPI1P17947 270 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 PCMT1P22061 227 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 GRK5P34947 590 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 DVL1P1P54792 670 aaPredicted RBP19.5■□□□□ 0.71
PTPN4-208ENST00000460289 AVPI1Q5T686 147 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 PEG10Q86TG7 708 aaKnown RBP19.5■□□□□ 0.71
PTPN4-208ENST00000460289 SPTSSAQ969W0 71 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 MAP6Q96JE9 813 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 ZNF582Q96NG8 517 aaPredicted RBP19.5■□□□□ 0.71
PTPN4-208ENST00000460289 IL19Q9UHD0 177 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 CACNG2Q9Y698 323 aa19.5■□□□□ 0.71
PTPN4-208ENST00000460289 GYPBP06028 91 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 ANPEPP15144 967 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 SELEP16581 610 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 ENTPD1P49961 510 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 LMO4P61968 165 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 MALLQ13021 153 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 TEX30Q5JUR7 227 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 OR2T2Q6IF00 324 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 SLC27A4Q6P1M0 643 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 Q6ZR03 302 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 OR8G5Q8NG78 346 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 HCAR1Q9BXC0 346 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 MMADHCQ9H3L0 296 aaPredicted RBP19.49■□□□□ 0.71
PTPN4-208ENST00000460289 WDR76Q9H967 626 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 TMEFF2Q9UIK5 374 aaPredicted RBP19.49■□□□□ 0.71
PTPN4-208ENST00000460289 WIPI2Q9Y4P8 454 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 COMMD3-BMI1R4GMX3 469 aa19.49■□□□□ 0.71
PTPN4-208ENST00000460289 ZNF593O00488 134 aaPredicted RBP19.48■□□□□ 0.71
PTPN4-208ENST00000460289 LCATP04180 440 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 SRD5A1P18405 259 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 POU1F1P28069 291 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 RPS27P42677 84 aaKnown RBP19.48■□□□□ 0.71
PTPN4-208ENST00000460289 ERFP50548 548 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 PCK2Q16822 640 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 CR1LQ2VPA4 569 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 DCXRQ7Z4W1 244 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 GLCCI1Q86VQ1 547 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 OR5AS1Q8N127 324 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 ZNF511Q8NB15 262 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 OR6K6Q8NGW6 343 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 OR13G1Q8NGZ3 307 aa19.48■□□□□ 0.71
PTPN4-208ENST00000460289 DDX28Q9NUL7 540 aaKnown RBP19.48■□□□□ 0.71
PTPN4-208ENST00000460289 M0R135 149 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 HMGN1P05114 100 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 SPARCP09486 303 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 OSMP13725 252 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 PAICSP22234 425 aaKnown RBP19.47■□□□□ 0.71
PTPN4-208ENST00000460289 GINS1Q14691 196 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 LYPD4Q6UWN0 246 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 IQCF1Q8N6M8 205 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 ATG16L2Q8NAA4 619 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 SLCO4A1Q96BD0 722 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 RAB39BQ96DA2 213 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 NRBF2Q96F24 287 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 ZNF799Q96GE5 643 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 TEX12Q9BXU0 123 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 ZNF665Q9H7R5 613 aa19.47■□□□□ 0.71
PTPN4-208ENST00000460289 IQCF6A8MYZ5 107 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 FAM157AC9JC47 383 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 DEAF1O75398 565 aaPredicted RBP19.46■□□□□ 0.71
PTPN4-208ENST00000460289 MSMBP08118 114 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 CLUP10909 449 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 PRKACGP22612 351 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 TAF13Q15543 124 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 ACSM5Q6NUN0 579 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 NAA40Q86UY6 237 aa19.46■□□□□ 0.71
PTPN4-208ENST00000460289 HS3ST5Q8IZT8 346 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms