RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CDC34P49427 236 aaPredicted RBP9.11□□□□□ -0.95
USP39-210ENST00000459775 KLRB1Q12918 225 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 MOGAT2Q3SYC2 334 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 TMEM201Q5SNT2 666 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 LRFN4Q6PJG9 635 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 LINGO2Q7L985 606 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 NUFIP2Q7Z417 695 aaKnown RBP9.11□□□□□ -0.95
USP39-210ENST00000459775 CD163Q86VB7 1156 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 RFLNBQ8N5W9 214 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 C9orf106Q8NAJ2 232 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 ADPRHL1Q8NDY3 354 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 OR10J5Q8NHC4 309 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 SARAFQ96BY9 339 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 RNFT2Q96EX2 444 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 OR2M2Q96R28 347 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 KCNK17Q96T54 332 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 TBX5Q99593 518 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 MRPL13Q9BYD1 178 aaKnown RBP9.11□□□□□ -0.95
USP39-210ENST00000459775 CCDC90BQ9GZT6 254 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 POFUT1Q9H488 388 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 CLEC2DQ9UHP7 191 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 PSORS1C1Q9UIG5 152 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 ENPP5Q9UJA9 477 aa9.11□□□□□ -0.95
USP39-210ENST00000459775 MCTS1Q9ULC4 181 aaKnown RBP9.11□□□□□ -0.95
USP39-210ENST00000459775 BTBD17A6NE02 478 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 ZNF729A6NN14 1252 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 SLC31A2O15432 143 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 MAGEB4O15481 346 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 KCNAB3O43448 404 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 SELENOFO60613 162 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 UPK3AO75631 287 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 SEC14L2O76054 403 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 ZNF432O94892 652 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 SCG5P05408 212 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 PGA4P0DJD7 388 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 PGA3P0DJD8 388 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 SMIM18P0DKX4 95 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 MAP2K4P45985 399 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 ALDH3B2P48448 385 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 DAP3P51398 398 aaKnown RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 FOXG1P55316 489 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 ST3GAL4Q11206 333 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 FOXF2Q12947 444 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 LINC01590Q5TEZ4 76 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 C9orf135Q5VTT2 229 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 NXNL2Q5VZ03 156 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 GFRALQ6UXV0 394 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 SEM1Q6ZVN7 128 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 MEPCEQ7L2J0 689 aaKnown RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 PROKR2Q8NFJ6 384 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 OR51G2Q8NGK0 314 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 LGALS12Q96DT0 336 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 SLC25A44Q96H78 314 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 LURAP1Q96LR2 239 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 INTS14Q96SY0 518 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 VRK1Q99986 396 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 WDR76Q9H967 626 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 ZFP57Q9NU63 452 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 KLHL21Q9UJP4 597 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 COA3Q9Y2R0 106 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 PTPN13Q12923 2485 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 LOC102725191A0A1B0GVB3 256 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 ZNF726A6NNF4 738 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 MPZL2O60487 215 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 TOXO94900 526 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 MT-ND2P03891 347 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 KRT8P05787 483 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 MTNR1AP48039 350 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 CLRN1P58418 232 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 SLC35A2P78381 396 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 GPR176Q14439 515 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 CNN3Q15417 329 aaKnown RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 ACSF3Q4G176 576 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 AAED1Q7RTV5 226 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 ADGRE4PQ86SQ3 457 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 TMEM123Q8N131 208 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 BPIFCQ8NFQ6 507 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 CPT1CQ8TCG5 803 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 ALKBH3Q96Q83 286 aaPredicted RBP9.1□□□□□ -0.95
USP39-210ENST00000459775 ALG12Q9BV10 488 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 PRRG3Q9BZD7 231 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 NARFLQ9H6Q4 476 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 CLCF1Q9UBD9 225 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 B9D1Q9UPM9 204 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 FAM215AQ9Y5M1 114 aa9.1□□□□□ -0.95
USP39-210ENST00000459775 IGLV1-36A0A0B4J1U3 117 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 TMEM82A0PJX8 343 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 DNPH1O43598 174 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 VAMP5O95183 116 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 TNFAIP8O95379 198 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 RENP00797 406 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 ABOP16442 354 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 PAICSP22234 425 aaKnown RBP9.09□□□□□ -0.95
USP39-210ENST00000459775 SIRPAP78324 504 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 BAMBIQ13145 260 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 SLC25A30Q5SVS4 291 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 P4HA3Q7Z4N8 544 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.09□□□□□ -0.95
USP39-210ENST00000459775 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
USP39-210ENST00000459775 OR52I1Q8NGK6 324 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms